==25658== Memcheck, a memory error detector ==25658== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25658== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25658== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedSrnModels -malloc_debug -malloc_dump -memory_info ==25658== Parent PID: 24253 ==25658== ==25658== ==25658== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25658== Open file descriptor 12: ==25658== at 0xEE5C0FD: pipe (pipe.c:29) ==25658== by 0x197C507D: ??? ==25658== by 0x13D154CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25658== by 0xEAAB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25658== by 0xEA44D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25658== by 0xD73BD38: PetscInitialize (pinit.c:924) ==25658== by 0xD5A8E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25658== by 0xD5A8EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25658== by 0x12E285: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25658== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25658== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25658== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25658== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25658== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==25658== ==25658== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25658== at 0xEE60A9C: __open_nocancel (open64_nocancel.c:39) ==25658== by 0xEDE4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25658== by 0xD5E6822: ??? ==25658== by 0xD5E696F: ??? ==25658== by 0x13DBA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25658== by 0x13DBA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25658== by 0x13D70922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25658== by 0x13D152DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25658== by 0xEAAB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25658== by 0xEA44D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25658== by 0xD73BD38: PetscInitialize (pinit.c:924) ==25658== by 0xD5A8E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25658== by 0xD5A8EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25658== by 0x12E285: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25658== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25658== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25658== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25658== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25658== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==25658== ==25658== Open file descriptor 145: ==25658== ==25658== ==25658== Open file descriptor 142: ==25658== ==25658== ==25658== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedSrnModels_valgrind.txt ==25658== ==25658== ==25658== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25658== ==25658== ==25658== ==25658== HEAP SUMMARY: ==25658== in use at exit: 35,215 bytes in 291 blocks ==25658== total heap usage: 41,078 allocs, 40,787 frees, 8,397,164 bytes allocated ==25658== ==25658== LEAK SUMMARY: ==25658== definitely lost: 0 bytes in 0 blocks ==25658== indirectly lost: 0 bytes in 0 blocks ==25658== possibly lost: 0 bytes in 0 blocks ==25658== still reachable: 72 bytes in 4 blocks ==25658== suppressed: 35,143 bytes in 287 blocks ==25658== Reachable blocks (those to which a pointer was found) are not shown. ==25658== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25658== ==25658== For lists of detected and suppressed errors, rerun with: -s ==25658== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)