==26409== Memcheck, a memory error detector ==26409== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26409== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26409== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellPopulationWriters -malloc_debug -malloc_dump -memory_info ==26409== Parent PID: 24019 ==26409== ==26409== ==26409== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26409== Open file descriptor 12: ==26409== at 0xF85C0FD: pipe (pipe.c:29) ==26409== by 0x196D007D: ??? ==26409== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26409== by 0x10156418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26409== by 0x100EFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26409== by 0x1029BD38: PetscInitialize (pinit.c:924) ==26409== by 0xF11AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26409== by 0xF11AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26409== by 0x146B04: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26409== by 0x13F5FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26409== by 0x14252E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26409== by 0x1423CE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26409== by 0x142A65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26409== by 0x13DA25: main (TestCellPopulationWriters.cpp:19) ==26409== ==26409== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26409== at 0xF860A9C: __open_nocancel (open64_nocancel.c:39) ==26409== by 0xF7E4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26409== by 0xF158822: ??? ==26409== by 0xF15896F: ??? ==26409== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26409== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26409== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26409== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26409== by 0x10156418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26409== by 0x100EFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26409== by 0x1029BD38: PetscInitialize (pinit.c:924) ==26409== by 0xF11AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26409== by 0xF11AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26409== by 0x146B04: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26409== by 0x13F5FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26409== by 0x14252E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26409== by 0x1423CE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26409== by 0x142A65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26409== by 0x13DA25: main (TestCellPopulationWriters.cpp:19) ==26409== ==26409== Open file descriptor 145: ==26409== ==26409== ==26409== Open file descriptor 142: ==26409== ==26409== ==26409== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellPopulationWriters_valgrind.txt ==26409== ==26409== ==26409== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26409== ==26409== ==26409== ==26409== HEAP SUMMARY: ==26409== in use at exit: 36,669 bytes in 311 blocks ==26409== total heap usage: 143,348 allocs, 143,037 frees, 68,104,971 bytes allocated ==26409== ==26409== LEAK SUMMARY: ==26409== definitely lost: 0 bytes in 0 blocks ==26409== indirectly lost: 0 bytes in 0 blocks ==26409== possibly lost: 0 bytes in 0 blocks ==26409== still reachable: 56 bytes in 3 blocks ==26409== suppressed: 36,613 bytes in 308 blocks ==26409== Reachable blocks (those to which a pointer was found) are not shown. ==26409== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26409== ==26409== For lists of detected and suppressed errors, rerun with: -s ==26409== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)