==25912== Memcheck, a memory error detector ==25912== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25912== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25912== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==25912== Parent PID: 24019 ==25912== ==25912== ==25912== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25912== Open file descriptor 12: ==25912== at 0xED260FD: pipe (pipe.c:29) ==25912== by 0x196D107D: ??? ==25912== by 0x13C214CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25912== by 0xE975418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25912== by 0xE90ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25912== by 0xD5E2D38: PetscInitialize (pinit.c:924) ==25912== by 0xD4B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25912== by 0xD4B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25912== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25912== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25912== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25912== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25912== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25912== by 0x1222F5: main (TestCell.cpp:19) ==25912== ==25912== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25912== at 0xED2AA9C: __open_nocancel (open64_nocancel.c:39) ==25912== by 0xECAEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25912== by 0xE872822: ??? ==25912== by 0xE87296F: ??? ==25912== by 0x13CC66DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25912== by 0x13CC6938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25912== by 0x13C7C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25912== by 0x13C212DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25912== by 0xE975418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25912== by 0xE90ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25912== by 0xD5E2D38: PetscInitialize (pinit.c:924) ==25912== by 0xD4B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25912== by 0xD4B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25912== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25912== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25912== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25912== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25912== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25912== by 0x1222F5: main (TestCell.cpp:19) ==25912== ==25912== Open file descriptor 145: ==25912== ==25912== ==25912== Open file descriptor 142: ==25912== ==25912== ==25912== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==25912== ==25912== ==25912== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25912== ==25912== ==25912== ==25912== HEAP SUMMARY: ==25912== in use at exit: 36,724 bytes in 308 blocks ==25912== total heap usage: 5,167,266 allocs, 5,166,958 frees, 488,141,271 bytes allocated ==25912== ==25912== LEAK SUMMARY: ==25912== definitely lost: 0 bytes in 0 blocks ==25912== indirectly lost: 0 bytes in 0 blocks ==25912== possibly lost: 0 bytes in 0 blocks ==25912== still reachable: 184 bytes in 4 blocks ==25912== suppressed: 36,540 bytes in 304 blocks ==25912== Reachable blocks (those to which a pointer was found) are not shown. ==25912== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25912== ==25912== For lists of detected and suppressed errors, rerun with: -s ==25912== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)