==25980== Memcheck, a memory error detector ==25980== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25980== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25980== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==25980== Parent PID: 24019 ==25980== ==25980== ==25980== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25980== Open file descriptor 12: ==25980== at 0xF81A0FD: pipe (pipe.c:29) ==25980== by 0x196D007D: ??? ==25980== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25980== by 0x10112418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25980== by 0x100ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25980== by 0x1029BD38: PetscInitialize (pinit.c:924) ==25980== by 0xF11AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25980== by 0xF11AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25980== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25980== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25980== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25980== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25980== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25980== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25980== ==25980== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25980== at 0xF81EA9C: __open_nocancel (open64_nocancel.c:39) ==25980== by 0xF7A2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25980== by 0xF158822: ??? ==25980== by 0xF15896F: ??? ==25980== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25980== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25980== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25980== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25980== by 0x10112418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25980== by 0x100ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25980== by 0x1029BD38: PetscInitialize (pinit.c:924) ==25980== by 0xF11AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25980== by 0xF11AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25980== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25980== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25980== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25980== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25980== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25980== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25980== ==25980== Open file descriptor 145: ==25980== ==25980== ==25980== Open file descriptor 142: ==25980== ==25980== ==25980== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==25980== ==25980== ==25980== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25980== ==25980== ==25980== ==25980== HEAP SUMMARY: ==25980== in use at exit: 36,733 bytes in 312 blocks ==25980== total heap usage: 53,165 allocs, 52,853 frees, 9,648,984 bytes allocated ==25980== ==25980== LEAK SUMMARY: ==25980== definitely lost: 0 bytes in 0 blocks ==25980== indirectly lost: 0 bytes in 0 blocks ==25980== possibly lost: 0 bytes in 0 blocks ==25980== still reachable: 120 bytes in 4 blocks ==25980== suppressed: 36,613 bytes in 308 blocks ==25980== Reachable blocks (those to which a pointer was found) are not shown. ==25980== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25980== ==25980== For lists of detected and suppressed errors, rerun with: -s ==25980== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)