==40095== Memcheck, a memory error detector ==40095== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40095== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40095== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==40095== Parent PID: 24019 ==40095== ==40095== ==40095== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40095== Open file descriptor 12: ==40095== at 0x10D130FD: pipe (pipe.c:29) ==40095== by 0x196D007D: ??? ==40095== by 0x14C8A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40095== by 0x10960418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40095== by 0x108F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40095== by 0xF5F0D38: PetscInitialize (pinit.c:924) ==40095== by 0xF11AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40095== by 0xF11AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40095== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40095== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40095== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40095== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40095== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40095== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==40095== ==40095== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40095== at 0x10D17A9C: __open_nocancel (open64_nocancel.c:39) ==40095== by 0x10C9BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40095== by 0xF158822: ??? ==40095== by 0xF15896F: ??? ==40095== by 0x14D2F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40095== by 0x14D2F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40095== by 0x14CE5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40095== by 0x14C8A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40095== by 0x10960418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40095== by 0x108F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40095== by 0xF5F0D38: PetscInitialize (pinit.c:924) ==40095== by 0xF11AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40095== by 0xF11AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40095== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40095== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40095== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40095== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40095== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40095== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==40095== ==40095== Open file descriptor 145: ==40095== ==40095== ==40095== Open file descriptor 142: ==40095== ==40095== ==40095== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==40095== ==40095== ==40095== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40095== ==40095== ==40095== ==40095== HEAP SUMMARY: ==40095== in use at exit: 36,596 bytes in 307 blocks ==40095== total heap usage: 4,248,448 allocs, 4,248,141 frees, 572,969,952 bytes allocated ==40095== ==40095== LEAK SUMMARY: ==40095== definitely lost: 0 bytes in 0 blocks ==40095== indirectly lost: 0 bytes in 0 blocks ==40095== possibly lost: 0 bytes in 0 blocks ==40095== still reachable: 56 bytes in 3 blocks ==40095== suppressed: 36,540 bytes in 304 blocks ==40095== Reachable blocks (those to which a pointer was found) are not shown. ==40095== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40095== ==40095== For lists of detected and suppressed errors, rerun with: -s ==40095== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)