==26519== Memcheck, a memory error detector ==26519== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26519== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26519== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMutableVertexMeshOperationsWithPopulationSrn -malloc_debug -malloc_dump -memory_info ==26519== Parent PID: 24019 ==26519== ==26519== ==26519== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26519== Open file descriptor 12: ==26519== at 0x10CD10FD: pipe (pipe.c:29) ==26519== by 0x196D007D: ??? ==26519== by 0x14C8A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26519== by 0x1091E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26519== by 0x108B7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26519== by 0xF5AED38: PetscInitialize (pinit.c:924) ==26519== by 0xF11AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26519== by 0xF11AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26519== by 0x12FA43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26519== by 0x12AAD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26519== by 0x12D2E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26519== by 0x12D1E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26519== by 0x12D7F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26519== by 0x1292D5: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==26519== ==26519== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26519== at 0x10CD5A9C: __open_nocancel (open64_nocancel.c:39) ==26519== by 0x10C59BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26519== by 0xF158822: ??? ==26519== by 0xF15896F: ??? ==26519== by 0x14D2F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26519== by 0x14D2F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26519== by 0x14CE5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26519== by 0x14C8A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26519== by 0x1091E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26519== by 0x108B7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26519== by 0xF5AED38: PetscInitialize (pinit.c:924) ==26519== by 0xF11AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26519== by 0xF11AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26519== by 0x12FA43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26519== by 0x12AAD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26519== by 0x12D2E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26519== by 0x12D1E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26519== by 0x12D7F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26519== by 0x1292D5: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==26519== ==26519== Open file descriptor 145: ==26519== ==26519== ==26519== Open file descriptor 142: ==26519== ==26519== ==26519== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMutableVertexMeshOperationsWithPopulationSrn_valgrind.txt ==26519== ==26519== ==26519== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26519== ==26519== ==26519== ==26519== HEAP SUMMARY: ==26519== in use at exit: 36,669 bytes in 311 blocks ==26519== total heap usage: 44,554 allocs, 44,243 frees, 8,261,331 bytes allocated ==26519== ==26519== LEAK SUMMARY: ==26519== definitely lost: 0 bytes in 0 blocks ==26519== indirectly lost: 0 bytes in 0 blocks ==26519== possibly lost: 0 bytes in 0 blocks ==26519== still reachable: 56 bytes in 3 blocks ==26519== suppressed: 36,613 bytes in 308 blocks ==26519== Reachable blocks (those to which a pointer was found) are not shown. ==26519== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26519== ==26519== For lists of detected and suppressed errors, rerun with: -s ==26519== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)