==26843== Memcheck, a memory error detector ==26843== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26843== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26843== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNumericalMethods -malloc_debug -malloc_dump -memory_info ==26843== Parent PID: 24019 ==26843== ==26843== ==26843== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26843== Open file descriptor 12: ==26843== at 0xF9010FD: pipe (pipe.c:29) ==26843== by 0x196D007D: ??? ==26843== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26843== by 0x101FB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26843== by 0x10194D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26843== by 0x10382D38: PetscInitialize (pinit.c:924) ==26843== by 0xF11AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26843== by 0xF11AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26843== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26843== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26843== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26843== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26843== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26843== by 0x133475: main (TestNumericalMethods.cpp:19) ==26843== ==26843== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26843== at 0xF905A9C: __open_nocancel (open64_nocancel.c:39) ==26843== by 0xF889BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26843== by 0xF158822: ??? ==26843== by 0xF15896F: ??? ==26843== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26843== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26843== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26843== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26843== by 0x101FB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26843== by 0x10194D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26843== by 0x10382D38: PetscInitialize (pinit.c:924) ==26843== by 0xF11AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26843== by 0xF11AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26843== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26843== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26843== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26843== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26843== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26843== by 0x133475: main (TestNumericalMethods.cpp:19) ==26843== ==26843== Open file descriptor 145: ==26843== ==26843== ==26843== Open file descriptor 142: ==26843== ==26843== ==26843== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNumericalMethods_valgrind.txt ==26843== ==26843== ==26843== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26843== ==26843== ==26843== ==26843== HEAP SUMMARY: ==26843== in use at exit: 36,669 bytes in 311 blocks ==26843== total heap usage: 53,261 allocs, 52,950 frees, 10,806,348 bytes allocated ==26843== ==26843== LEAK SUMMARY: ==26843== definitely lost: 0 bytes in 0 blocks ==26843== indirectly lost: 0 bytes in 0 blocks ==26843== possibly lost: 0 bytes in 0 blocks ==26843== still reachable: 56 bytes in 3 blocks ==26843== suppressed: 36,613 bytes in 308 blocks ==26843== Reachable blocks (those to which a pointer was found) are not shown. ==26843== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26843== ==26843== For lists of detected and suppressed errors, rerun with: -s ==26843== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)