==26014== Memcheck, a memory error detector ==26014== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26014== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26014== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimpleCellCycleModels -malloc_debug -malloc_dump -memory_info ==26014== Parent PID: 24019 ==26014== ==26014== ==26014== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26014== Open file descriptor 12: ==26014== at 0xED680FD: pipe (pipe.c:29) ==26014== by 0x196D107D: ??? ==26014== by 0x13C214CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26014== by 0xE9B7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26014== by 0xE950D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26014== by 0xD647D38: PetscInitialize (pinit.c:924) ==26014== by 0xD4B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26014== by 0xD4B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26014== by 0x137E7B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26014== by 0x13098F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26014== by 0x133A5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26014== by 0x1338FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26014== by 0x133F93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26014== by 0x12D2C5: main (TestSimpleCellCycleModels.cpp:19) ==26014== ==26014== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26014== at 0xED6CA9C: __open_nocancel (open64_nocancel.c:39) ==26014== by 0xECF0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26014== by 0xD4F2822: ??? ==26014== by 0xD4F296F: ??? ==26014== by 0x13CC66DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26014== by 0x13CC6938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26014== by 0x13C7C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26014== by 0x13C212DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26014== by 0xE9B7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26014== by 0xE950D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26014== by 0xD647D38: PetscInitialize (pinit.c:924) ==26014== by 0xD4B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26014== by 0xD4B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26014== by 0x137E7B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26014== by 0x13098F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26014== by 0x133A5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26014== by 0x1338FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26014== by 0x133F93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26014== by 0x12D2C5: main (TestSimpleCellCycleModels.cpp:19) ==26014== ==26014== Open file descriptor 145: ==26014== ==26014== ==26014== Open file descriptor 142: ==26014== ==26014== ==26014== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModels_valgrind.txt ==26014== ==26014== ==26014== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26014== ==26014== ==26014== ==26014== HEAP SUMMARY: ==26014== in use at exit: 36,701 bytes in 312 blocks ==26014== total heap usage: 62,698 allocs, 62,386 frees, 11,211,995 bytes allocated ==26014== ==26014== LEAK SUMMARY: ==26014== definitely lost: 0 bytes in 0 blocks ==26014== indirectly lost: 0 bytes in 0 blocks ==26014== possibly lost: 0 bytes in 0 blocks ==26014== still reachable: 88 bytes in 4 blocks ==26014== suppressed: 36,613 bytes in 308 blocks ==26014== Reachable blocks (those to which a pointer was found) are not shown. ==26014== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26014== ==26014== For lists of detected and suppressed errors, rerun with: -s ==26014== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)