==26145== Memcheck, a memory error detector ==26145== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26145== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26145== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellPopulationBoundaryConditions -malloc_debug -malloc_dump -memory_info ==26145== Parent PID: 24236 ==26145== ==26145== ==26145== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26145== Open file descriptor 12: ==26145== at 0xFC430FD: pipe (pipe.c:29) ==26145== by 0x199D107D: ??? ==26145== by 0x12E324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26145== by 0x1053B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26145== by 0x104D4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26145== by 0x10680D38: PetscInitialize (pinit.c:924) ==26145== by 0xF418E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26145== by 0xF418EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26145== by 0x155002: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26145== by 0x14DC1D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26145== by 0x150A72: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26145== by 0x150912: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26145== by 0x150FA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26145== by 0x14C045: main (TestCellPopulationBoundaryConditions.cpp:19) ==26145== ==26145== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26145== at 0xFC47A9C: __open_nocancel (open64_nocancel.c:39) ==26145== by 0xFBCBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26145== by 0xF456822: ??? ==26145== by 0xF45696F: ??? ==26145== by 0x12ED76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26145== by 0x12ED7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26145== by 0x12E8D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26145== by 0x12E322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26145== by 0x1053B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26145== by 0x104D4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26145== by 0x10680D38: PetscInitialize (pinit.c:924) ==26145== by 0xF418E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26145== by 0xF418EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26145== by 0x155002: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26145== by 0x14DC1D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26145== by 0x150A72: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26145== by 0x150912: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26145== by 0x150FA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26145== by 0x14C045: main (TestCellPopulationBoundaryConditions.cpp:19) ==26145== ==26145== Open file descriptor 145: ==26145== ==26145== ==26145== Open file descriptor 142: ==26145== ==26145== ==26145== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellPopulationBoundaryConditions_valgrind.txt ==26145== ==26145== ==26145== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26145== ==26145== ==26145== ==26145== HEAP SUMMARY: ==26145== in use at exit: 35,199 bytes in 290 blocks ==26145== total heap usage: 54,349 allocs, 54,059 frees, 11,393,263 bytes allocated ==26145== ==26145== LEAK SUMMARY: ==26145== definitely lost: 0 bytes in 0 blocks ==26145== indirectly lost: 0 bytes in 0 blocks ==26145== possibly lost: 0 bytes in 0 blocks ==26145== still reachable: 56 bytes in 3 blocks ==26145== suppressed: 35,143 bytes in 287 blocks ==26145== Reachable blocks (those to which a pointer was found) are not shown. ==26145== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26145== ==26145== For lists of detected and suppressed errors, rerun with: -s ==26145== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)