==39888== Memcheck, a memory error detector ==39888== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39888== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39888== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==39888== Parent PID: 24236 ==39888== ==39888== ==39888== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39888== Open file descriptor 12: ==39888== at 0x110110FD: pipe (pipe.c:29) ==39888== by 0x199CF07D: ??? ==39888== by 0x14F814CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39888== by 0x10C5E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39888== by 0x10BF7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39888== by 0xF8EED38: PetscInitialize (pinit.c:924) ==39888== by 0xF418E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39888== by 0xF418EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39888== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39888== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39888== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39888== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39888== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39888== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==39888== ==39888== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39888== at 0x11015A9C: __open_nocancel (open64_nocancel.c:39) ==39888== by 0x10F99BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39888== by 0xF456822: ??? ==39888== by 0xF45696F: ??? ==39888== by 0x150266DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39888== by 0x15026938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39888== by 0x14FDC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39888== by 0x14F812DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39888== by 0x10C5E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39888== by 0x10BF7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39888== by 0xF8EED38: PetscInitialize (pinit.c:924) ==39888== by 0xF418E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39888== by 0xF418EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39888== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39888== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39888== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39888== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39888== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39888== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==39888== ==39888== Open file descriptor 145: ==39888== ==39888== ==39888== Open file descriptor 142: ==39888== ==39888== ==39888== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==39888== ==39888== ==39888== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39888== ==39888== ==39888== ==39888== HEAP SUMMARY: ==39888== in use at exit: 35,126 bytes in 286 blocks ==39888== total heap usage: 4,248,719 allocs, 4,248,433 frees, 572,948,636 bytes allocated ==39888== ==39888== LEAK SUMMARY: ==39888== definitely lost: 0 bytes in 0 blocks ==39888== indirectly lost: 0 bytes in 0 blocks ==39888== possibly lost: 0 bytes in 0 blocks ==39888== still reachable: 56 bytes in 3 blocks ==39888== suppressed: 35,070 bytes in 283 blocks ==39888== Reachable blocks (those to which a pointer was found) are not shown. ==39888== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39888== ==39888== For lists of detected and suppressed errors, rerun with: -s ==39888== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 31 from 31)