==26288== Memcheck, a memory error detector ==26288== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26288== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26288== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26288== Parent PID: 24236 ==26288== ==26288== ==26288== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26288== Open file descriptor 12: ==26288== at 0xFBEB0FD: pipe (pipe.c:29) ==26288== by 0x199D107D: ??? ==26288== by 0x12E324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26288== by 0x10454418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26288== by 0x103EDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26288== by 0x10599D38: PetscInitialize (pinit.c:924) ==26288== by 0xF4A7E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26288== by 0xF4A7EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26288== by 0x2E24B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26288== by 0x2D90D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26288== by 0x2DD936: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26288== by 0x2DD7D6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26288== by 0x2DDE6D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26288== by 0x2D74F5: main (TestNodeBasedCellPopulation.cpp:19) ==26288== ==26288== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26288== at 0xFBEFA9C: __open_nocancel (open64_nocancel.c:39) ==26288== by 0xFB73BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26288== by 0xF4E5822: ??? ==26288== by 0xF4E596F: ??? ==26288== by 0x12ED76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26288== by 0x12ED7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26288== by 0x12E8D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26288== by 0x12E322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26288== by 0x10454418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26288== by 0x103EDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26288== by 0x10599D38: PetscInitialize (pinit.c:924) ==26288== by 0xF4A7E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26288== by 0xF4A7EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26288== by 0x2E24B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26288== by 0x2D90D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26288== by 0x2DD936: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26288== by 0x2DD7D6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26288== by 0x2DDE6D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26288== by 0x2D74F5: main (TestNodeBasedCellPopulation.cpp:19) ==26288== ==26288== Open file descriptor 145: ==26288== ==26288== ==26288== Open file descriptor 142: ==26288== ==26288== ==26288== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==26288== ==26288== ==26288== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26288== ==26288== ==26288== ==26288== HEAP SUMMARY: ==26288== in use at exit: 35,126 bytes in 286 blocks ==26288== total heap usage: 30,274,719 allocs, 30,274,433 frees, 1,833,696,365 bytes allocated ==26288== ==26288== LEAK SUMMARY: ==26288== definitely lost: 0 bytes in 0 blocks ==26288== indirectly lost: 0 bytes in 0 blocks ==26288== possibly lost: 0 bytes in 0 blocks ==26288== still reachable: 56 bytes in 3 blocks ==26288== suppressed: 35,070 bytes in 283 blocks ==26288== Reachable blocks (those to which a pointer was found) are not shown. ==26288== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26288== ==26288== For lists of detected and suppressed errors, rerun with: -s ==26288== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)