==40373== Memcheck, a memory error detector ==40373== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40373== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40373== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSimpleCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==40373== Parent PID: 24236 ==40373== ==40373== ==40373== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40373== Open file descriptor 12: ==40373== at 0x10CAA0FD: pipe (pipe.c:29) ==40373== by 0x1B6CD07D: ??? ==40373== by 0x1581C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40373== by 0x105B2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40373== by 0x1054BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40373== by 0x62B4D38: PetscInitialize (pinit.c:924) ==40373== by 0x10494E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40373== by 0x10494EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40373== by 0x18F0ED: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40373== by 0x18756B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40373== by 0x18A860: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40373== by 0x18A700: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40373== by 0x18AD97: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40373== by 0x183E95: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==40373== ==40373== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40373== at 0x10CAEA9C: __open_nocancel (open64_nocancel.c:39) ==40373== by 0x10C32BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40373== by 0x615F822: ??? ==40373== by 0x615F96F: ??? ==40373== by 0x158C16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40373== by 0x158C1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40373== by 0x15877922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40373== by 0x1581C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40373== by 0x105B2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40373== by 0x1054BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40373== by 0x62B4D38: PetscInitialize (pinit.c:924) ==40373== by 0x10494E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40373== by 0x10494EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40373== by 0x18F0ED: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40373== by 0x18756B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40373== by 0x18A860: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40373== by 0x18A700: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40373== by 0x18AD97: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40373== by 0x183E95: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==40373== ==40373== Open file descriptor 145: ==40373== ==40373== ==40373== Open file descriptor 142: ==40373== ==40373== ==40373== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModelsForCrypt_valgrind.txt ==40373== ==40373== ==40373== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40373== ==40373== ==40373== ==40373== HEAP SUMMARY: ==40373== in use at exit: 35,279 bytes in 291 blocks ==40373== total heap usage: 738,770 allocs, 738,479 frees, 41,711,393 bytes allocated ==40373== ==40373== LEAK SUMMARY: ==40373== definitely lost: 0 bytes in 0 blocks ==40373== indirectly lost: 0 bytes in 0 blocks ==40373== possibly lost: 0 bytes in 0 blocks ==40373== still reachable: 120 bytes in 4 blocks ==40373== suppressed: 35,159 bytes in 287 blocks ==40373== Reachable blocks (those to which a pointer was found) are not shown. ==40373== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40373== ==40373== For lists of detected and suppressed errors, rerun with: -s ==40373== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)