==41219== Memcheck, a memory error detector ==41219== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41219== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41219== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithBathProblem -malloc_debug -malloc_dump -memory_info ==41219== Parent PID: 24209 ==41219== ==41219== ==41219== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41219== Open file descriptor 12: ==41219== at 0xAC940FD: pipe (pipe.c:29) ==41219== by 0x1435B07D: ??? ==41219== by 0xD99D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41219== by 0xB062418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41219== by 0xAFFBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41219== by 0xB53DD38: PetscInitialize (pinit.c:924) ==41219== by 0xA491E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41219== by 0xA491EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41219== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41219== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41219== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41219== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41219== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41219== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==41219== ==41219== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41219== at 0xAC98A9C: __open_nocancel (open64_nocancel.c:39) ==41219== by 0xAC1CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41219== by 0xA4D4822: ??? ==41219== by 0xA4D496F: ??? ==41219== by 0xDA426DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41219== by 0xDA42938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41219== by 0xD9F8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41219== by 0xD99D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41219== by 0xB062418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41219== by 0xAFFBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41219== by 0xB53DD38: PetscInitialize (pinit.c:924) ==41219== by 0xA491E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41219== by 0xA491EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41219== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41219== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41219== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41219== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41219== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41219== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==41219== ==41219== Open file descriptor 145: ==41219== ==41219== ==41219== Open file descriptor 142: ==41219== ==41219== ==41219== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithBathProblem_valgrind.txt ==41219== ==41219== ==41219== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41219== ==41219== ==41219== ==41219== HEAP SUMMARY: ==41219== in use at exit: 35,606 bytes in 295 blocks ==41219== total heap usage: 1,378,093 allocs, 1,377,798 frees, 656,484,610 bytes allocated ==41219== ==41219== LEAK SUMMARY: ==41219== definitely lost: 0 bytes in 0 blocks ==41219== indirectly lost: 0 bytes in 0 blocks ==41219== possibly lost: 0 bytes in 0 blocks ==41219== still reachable: 24 bytes in 2 blocks ==41219== suppressed: 35,582 bytes in 293 blocks ==41219== Reachable blocks (those to which a pointer was found) are not shown. ==41219== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41219== ==41219== For lists of detected and suppressed errors, rerun with: -s ==41219== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 66 from 31)