==41028== Memcheck, a memory error detector ==41028== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41028== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41028== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestMirams2010WntOdeSystem -malloc_debug -malloc_dump -memory_info ==41028== Parent PID: 24169 ==41028== ==41028== ==41028== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41028== Open file descriptor 12: ==41028== at 0xF3B50FD: pipe (pipe.c:29) ==41028== by 0x1B39407D: ??? ==41028== by 0x143E14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41028== by 0x11AFD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41028== by 0x11A96D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41028== by 0x11C42D38: PetscInitialize (pinit.c:924) ==41028== by 0xF01DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41028== by 0xF01DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41028== by 0x1261EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41028== by 0x12141B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41028== by 0x123B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41028== by 0x123A5C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41028== by 0x12406F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41028== by 0x11F065: main (TestMirams2010WntOdeSystem.cpp:18) ==41028== ==41028== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41028== at 0xF3B9A9C: __open_nocancel (open64_nocancel.c:39) ==41028== by 0xF33DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41028== by 0x6127822: ??? ==41028== by 0x612796F: ??? ==41028== by 0x144866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41028== by 0x14486938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41028== by 0x1443C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41028== by 0x143E12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41028== by 0x11AFD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41028== by 0x11A96D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41028== by 0x11C42D38: PetscInitialize (pinit.c:924) ==41028== by 0xF01DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41028== by 0xF01DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41028== by 0x1261EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41028== by 0x12141B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41028== by 0x123B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41028== by 0x123A5C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41028== by 0x12406F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41028== by 0x11F065: main (TestMirams2010WntOdeSystem.cpp:18) ==41028== ==41028== Open file descriptor 145: ==41028== ==41028== ==41028== Open file descriptor 142: ==41028== ==41028== ==41028== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMirams2010WntOdeSystem_valgrind.txt ==41028== ==41028== ==41028== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41028== ==41028== ==41028== ==41028== HEAP SUMMARY: ==41028== in use at exit: 35,231 bytes in 290 blocks ==41028== total heap usage: 50,619 allocs, 50,329 frees, 9,286,010 bytes allocated ==41028== ==41028== LEAK SUMMARY: ==41028== definitely lost: 0 bytes in 0 blocks ==41028== indirectly lost: 0 bytes in 0 blocks ==41028== possibly lost: 0 bytes in 0 blocks ==41028== still reachable: 56 bytes in 3 blocks ==41028== suppressed: 35,175 bytes in 287 blocks ==41028== Reachable blocks (those to which a pointer was found) are not shown. ==41028== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41028== ==41028== For lists of detected and suppressed errors, rerun with: -s ==41028== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)