==40952== Memcheck, a memory error detector ==40952== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40952== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40952== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMajorAirwaysCentreLinesCleaner -malloc_debug -malloc_dump -memory_info ==40952== Parent PID: 24126 ==40952== ==40952== ==40952== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40952== Open file descriptor 12: ==40952== at 0x82410FD: pipe (pipe.c:29) ==40952== by 0x107C207D: ??? ==40952== by 0xBD014CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40952== by 0x7B49418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40952== by 0x7AE2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40952== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40952== by 0x7A08E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40952== by 0x7A08EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40952== by 0x11675D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40952== by 0x1121F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40952== by 0x1146F0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40952== by 0x1145EB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40952== by 0x114BFF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40952== by 0x1109F5: main (TestMajorAirwaysCentreLinesCleaner.cpp:18) ==40952== ==40952== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40952== at 0x8245A9C: __open_nocancel (open64_nocancel.c:39) ==40952== by 0x81C9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40952== by 0x7A4B822: ??? ==40952== by 0x7A4B96F: ??? ==40952== by 0xBDA66DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40952== by 0xBDA6938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40952== by 0xBD5C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40952== by 0xBD012DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40952== by 0x7B49418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40952== by 0x7AE2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40952== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40952== by 0x7A08E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40952== by 0x7A08EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40952== by 0x11675D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40952== by 0x1121F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40952== by 0x1146F0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40952== by 0x1145EB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40952== by 0x114BFF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40952== by 0x1109F5: main (TestMajorAirwaysCentreLinesCleaner.cpp:18) ==40952== ==40952== Open file descriptor 145: ==40952== ==40952== ==40952== Open file descriptor 142: ==40952== ==40952== ==40952== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMajorAirwaysCentreLinesCleaner_valgrind.txt ==40952== ==40952== ==40952== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40952== ==40952== ==40952== ==40952== HEAP SUMMARY: ==40952== in use at exit: 35,183 bytes in 289 blocks ==40952== total heap usage: 477,162 allocs, 476,873 frees, 26,164,202 bytes allocated ==40952== ==40952== LEAK SUMMARY: ==40952== definitely lost: 0 bytes in 0 blocks ==40952== indirectly lost: 0 bytes in 0 blocks ==40952== possibly lost: 0 bytes in 0 blocks ==40952== still reachable: 24 bytes in 2 blocks ==40952== suppressed: 35,159 bytes in 287 blocks ==40952== Reachable blocks (those to which a pointer was found) are not shown. ==40952== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40952== ==40952== For lists of detected and suppressed errors, rerun with: -s ==40952== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)