==40759== Memcheck, a memory error detector ==40759== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40759== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40759== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestArchivingExtendedBidomain -malloc_debug -malloc_dump -memory_info ==40759== Parent PID: 23875 ==40759== ==40759== ==40759== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40759== Open file descriptor 12: ==40759== at 0xBD7A0FD: pipe (pipe.c:29) ==40759== by 0x1435B07D: ??? ==40759== by 0xFB1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40759== by 0xB684418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40759== by 0xB61DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40759== by 0x826CD38: PetscInitialize (pinit.c:924) ==40759== by 0xB54CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40759== by 0xB54CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40759== by 0x12EEDE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40759== by 0x129C33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40759== by 0x12CAFA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40759== by 0x12C9F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40759== by 0x12D009: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40759== by 0x1283E5: main (TestArchivingExtendedBidomain.cpp:18) ==40759== ==40759== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40759== at 0xBD7EA9C: __open_nocancel (open64_nocancel.c:39) ==40759== by 0xBD02BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40759== by 0x811C822: ??? ==40759== by 0x811C96F: ??? ==40759== by 0xFBC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40759== by 0xFBC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40759== by 0xFB79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40759== by 0xFB1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40759== by 0xB684418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40759== by 0xB61DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40759== by 0x826CD38: PetscInitialize (pinit.c:924) ==40759== by 0xB54CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40759== by 0xB54CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40759== by 0x12EEDE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40759== by 0x129C33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40759== by 0x12CAFA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40759== by 0x12C9F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40759== by 0x12D009: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40759== by 0x1283E5: main (TestArchivingExtendedBidomain.cpp:18) ==40759== ==40759== Open file descriptor 145: ==40759== ==40759== ==40759== Open file descriptor 142: ==40759== ==40759== ==40759== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestArchivingExtendedBidomain_valgrind.txt ==40759== ==40759== ==40759== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40759== ==40759== ==40759== ==40759== HEAP SUMMARY: ==40759== in use at exit: 37,149 bytes in 320 blocks ==40759== total heap usage: 335,959 allocs, 335,639 frees, 108,990,170 bytes allocated ==40759== ==40759== LEAK SUMMARY: ==40759== definitely lost: 0 bytes in 0 blocks ==40759== indirectly lost: 0 bytes in 0 blocks ==40759== possibly lost: 0 bytes in 0 blocks ==40759== still reachable: 24 bytes in 2 blocks ==40759== suppressed: 37,125 bytes in 318 blocks ==40759== Reachable blocks (those to which a pointer was found) are not shown. ==40759== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40759== ==40759== For lists of detected and suppressed errors, rerun with: -s ==40759== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 52 from 35)