==40786== Memcheck, a memory error detector ==40786== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40786== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40786== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==40786== Parent PID: 23875 ==40786== ==40786== ==40786== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40786== Open file descriptor 12: ==40786== at 0xA9BA0FD: pipe (pipe.c:29) ==40786== by 0x1435B07D: ??? ==40786== by 0xD95E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40786== by 0xA2C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40786== by 0xA25BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40786== by 0xB12CD38: PetscInitialize (pinit.c:924) ==40786== by 0xA167E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40786== by 0xA167EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40786== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40786== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40786== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40786== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40786== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40786== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==40786== ==40786== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40786== at 0xA9BEA9C: __open_nocancel (open64_nocancel.c:39) ==40786== by 0xA942BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40786== by 0xA1AA822: ??? ==40786== by 0xA1AA96F: ??? ==40786== by 0xDA036DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40786== by 0xDA03938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40786== by 0xD9B9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40786== by 0xD95E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40786== by 0xA2C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40786== by 0xA25BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40786== by 0xB12CD38: PetscInitialize (pinit.c:924) ==40786== by 0xA167E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40786== by 0xA167EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40786== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40786== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40786== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40786== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40786== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40786== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==40786== ==40786== Open file descriptor 145: ==40786== ==40786== ==40786== Open file descriptor 142: ==40786== ==40786== ==40786== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==40786== ==40786== ==40786== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40786== ==40786== ==40786== ==40786== HEAP SUMMARY: ==40786== in use at exit: 37,076 bytes in 316 blocks ==40786== total heap usage: 2,356,706 allocs, 2,356,390 frees, 1,137,238,748 bytes allocated ==40786== ==40786== LEAK SUMMARY: ==40786== definitely lost: 0 bytes in 0 blocks ==40786== indirectly lost: 0 bytes in 0 blocks ==40786== possibly lost: 0 bytes in 0 blocks ==40786== still reachable: 24 bytes in 2 blocks ==40786== suppressed: 37,052 bytes in 314 blocks ==40786== Reachable blocks (those to which a pointer was found) are not shown. ==40786== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40786== ==40786== For lists of detected and suppressed errors, rerun with: -s ==40786== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 31)