==40778== Memcheck, a memory error detector ==40778== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40778== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40778== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedVsBidomainProblem -malloc_debug -malloc_dump -memory_info ==40778== Parent PID: 23875 ==40778== ==40778== ==40778== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40778== Open file descriptor 12: ==40778== at 0xAC200FD: pipe (pipe.c:29) ==40778== by 0x1435B07D: ??? ==40778== by 0xD99D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40778== by 0xAFEE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40778== by 0xAF87D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40778== by 0xB4C9D38: PetscInitialize (pinit.c:924) ==40778== by 0xA504E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40778== by 0xA504EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40778== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40778== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40778== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40778== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40778== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40778== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==40778== ==40778== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40778== at 0xAC24A9C: __open_nocancel (open64_nocancel.c:39) ==40778== by 0xABA8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40778== by 0xA547822: ??? ==40778== by 0xA54796F: ??? ==40778== by 0xDA426DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40778== by 0xDA42938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40778== by 0xD9F8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40778== by 0xD99D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40778== by 0xAFEE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40778== by 0xAF87D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40778== by 0xB4C9D38: PetscInitialize (pinit.c:924) ==40778== by 0xA504E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40778== by 0xA504EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40778== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40778== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40778== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40778== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40778== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40778== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==40778== ==40778== Open file descriptor 145: ==40778== ==40778== ==40778== Open file descriptor 142: ==40778== ==40778== ==40778== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedVsBidomainProblem_valgrind.txt ==40778== ==40778== ==40778== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40778== ==40778== ==40778== ==40778== HEAP SUMMARY: ==40778== in use at exit: 37,149 bytes in 320 blocks ==40778== total heap usage: 449,838 allocs, 449,518 frees, 115,131,316 bytes allocated ==40778== ==40778== LEAK SUMMARY: ==40778== definitely lost: 0 bytes in 0 blocks ==40778== indirectly lost: 0 bytes in 0 blocks ==40778== possibly lost: 0 bytes in 0 blocks ==40778== still reachable: 24 bytes in 2 blocks ==40778== suppressed: 37,125 bytes in 318 blocks ==40778== Reachable blocks (those to which a pointer was found) are not shown. ==40778== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40778== ==40778== For lists of detected and suppressed errors, rerun with: -s ==40778== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 61 from 35)