==43004== Memcheck, a memory error detector ==43004== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43004== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43004== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==43004== Parent PID: 23875 ==43004== ==43004== ==43004== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43004== Open file descriptor 12: ==43004== at 0xA8DC0FD: pipe (pipe.c:29) ==43004== by 0x1435B07D: ??? ==43004== by 0xD99D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43004== by 0xACA8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43004== by 0xAC41D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43004== by 0xB185D38: PetscInitialize (pinit.c:924) ==43004== by 0xA1C0E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43004== by 0xA1C0EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43004== by 0x1241F8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43004== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43004== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43004== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43004== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43004== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==43004== ==43004== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43004== at 0xA8E0A9C: __open_nocancel (open64_nocancel.c:39) ==43004== by 0xA864BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43004== by 0xA203822: ??? ==43004== by 0xA20396F: ??? ==43004== by 0xDA426DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43004== by 0xDA42938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43004== by 0xD9F8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43004== by 0xD99D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43004== by 0xACA8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43004== by 0xAC41D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43004== by 0xB185D38: PetscInitialize (pinit.c:924) ==43004== by 0xA1C0E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43004== by 0xA1C0EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43004== by 0x1241F8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43004== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43004== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43004== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43004== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43004== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==43004== ==43004== Open file descriptor 145: ==43004== ==43004== ==43004== Open file descriptor 142: ==43004== ==43004== ==43004== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==43004== ==43004== ==43004== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43004== ==43004== ==43004== ==43004== HEAP SUMMARY: ==43004== in use at exit: 36,669 bytes in 310 blocks ==43004== total heap usage: 104,047 allocs, 103,737 frees, 35,150,084 bytes allocated ==43004== ==43004== LEAK SUMMARY: ==43004== definitely lost: 0 bytes in 0 blocks ==43004== indirectly lost: 0 bytes in 0 blocks ==43004== possibly lost: 0 bytes in 0 blocks ==43004== still reachable: 24 bytes in 2 blocks ==43004== suppressed: 36,645 bytes in 308 blocks ==43004== Reachable blocks (those to which a pointer was found) are not shown. ==43004== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43004== ==43004== For lists of detected and suppressed errors, rerun with: -s ==43004== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)