==40675== Memcheck, a memory error detector ==40675== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40675== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40675== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMultiLobeAirwayGenerator -malloc_debug -malloc_dump -memory_info ==40675== Parent PID: 23875 ==40675== ==40675== ==40675== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40675== Open file descriptor 12: ==40675== at 0x8D450FD: pipe (pipe.c:29) ==40675== by 0x107C207D: ??? ==40675== by 0xBE2C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40675== by 0x7B49418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40675== by 0x7AE2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40675== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40675== by 0x7A08E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40675== by 0x7A08EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40675== by 0x11A3B7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40675== by 0x11592D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40675== by 0x118434: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40675== by 0x1182D4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40675== by 0x11896B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40675== by 0x113D55: main (TestMultiLobeAirwayGenerator.cpp:19) ==40675== ==40675== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40675== at 0x8D49A9C: __open_nocancel (open64_nocancel.c:39) ==40675== by 0x8CCDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40675== by 0x7A4B822: ??? ==40675== by 0x7A4B96F: ??? ==40675== by 0xBED16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40675== by 0xBED1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40675== by 0xBE87922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40675== by 0xBE2C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40675== by 0x7B49418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40675== by 0x7AE2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40675== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40675== by 0x7A08E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40675== by 0x7A08EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40675== by 0x11A3B7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40675== by 0x11592D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40675== by 0x118434: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40675== by 0x1182D4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40675== by 0x11896B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40675== by 0x113D55: main (TestMultiLobeAirwayGenerator.cpp:19) ==40675== ==40675== Open file descriptor 145: ==40675== ==40675== ==40675== Open file descriptor 142: ==40675== ==40675== ==40675== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMultiLobeAirwayGenerator_valgrind.txt ==40675== ==40675== ==40675== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40675== ==40675== ==40675== ==40675== HEAP SUMMARY: ==40675== in use at exit: 36,653 bytes in 310 blocks ==40675== total heap usage: 105,043 allocs, 104,733 frees, 59,410,586 bytes allocated ==40675== ==40675== LEAK SUMMARY: ==40675== definitely lost: 0 bytes in 0 blocks ==40675== indirectly lost: 0 bytes in 0 blocks ==40675== possibly lost: 0 bytes in 0 blocks ==40675== still reachable: 24 bytes in 2 blocks ==40675== suppressed: 36,629 bytes in 308 blocks ==40675== Reachable blocks (those to which a pointer was found) are not shown. ==40675== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40675== ==40675== For lists of detected and suppressed errors, rerun with: -s ==40675== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)