==39966== Memcheck, a memory error detector ==39966== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39966== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39966== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexCryptBoundaryForce -malloc_debug -malloc_dump -memory_info ==39966== Parent PID: 23875 ==39966== ==39966== ==39966== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39966== Open file descriptor 12: ==39966== at 0x110DA0FD: pipe (pipe.c:29) ==39966== by 0x1B39707D: ??? ==39966== by 0x143E54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39966== by 0x11AFD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39966== by 0x11A96D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39966== by 0x11C42D38: PetscInitialize (pinit.c:924) ==39966== by 0x109DAE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39966== by 0x109DAEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39966== by 0x126AD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39966== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39966== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39966== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39966== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39966== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==39966== ==39966== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39966== at 0x110DEA9C: __open_nocancel (open64_nocancel.c:39) ==39966== by 0x11062BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39966== by 0x10A1D822: ??? ==39966== by 0x10A1D96F: ??? ==39966== by 0x1448A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39966== by 0x1448A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39966== by 0x14440922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39966== by 0x143E52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39966== by 0x11AFD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39966== by 0x11A96D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39966== by 0x11C42D38: PetscInitialize (pinit.c:924) ==39966== by 0x109DAE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39966== by 0x109DAEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39966== by 0x126AD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39966== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39966== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39966== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39966== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39966== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==39966== ==39966== Open file descriptor 145: ==39966== ==39966== ==39966== Open file descriptor 142: ==39966== ==39966== ==39966== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexCryptBoundaryForce_valgrind.txt ==39966== ==39966== ==39966== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39966== ==39966== ==39966== ==39966== HEAP SUMMARY: ==39966== in use at exit: 36,701 bytes in 311 blocks ==39966== total heap usage: 40,258 allocs, 39,947 frees, 8,131,660 bytes allocated ==39966== ==39966== LEAK SUMMARY: ==39966== definitely lost: 0 bytes in 0 blocks ==39966== indirectly lost: 0 bytes in 0 blocks ==39966== possibly lost: 0 bytes in 0 blocks ==39966== still reachable: 56 bytes in 3 blocks ==39966== suppressed: 36,645 bytes in 308 blocks ==39966== Reachable blocks (those to which a pointer was found) are not shown. ==39966== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39966== ==39966== For lists of detected and suppressed errors, rerun with: -s ==39966== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)