==40077== Memcheck, a memory error detector ==40077== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40077== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40077== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestWntCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==40077== Parent PID: 23875 ==40077== ==40077== ==40077== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40077== Open file descriptor 12: ==40077== at 0x1086C0FD: pipe (pipe.c:29) ==40077== by 0x1B39707D: ??? ==40077== by 0x155324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40077== by 0x104B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40077== by 0x10452D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40077== by 0x6277D38: PetscInitialize (pinit.c:924) ==40077== by 0x1039BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40077== by 0x1039BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40077== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40077== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40077== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40077== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40077== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40077== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40077== ==40077== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40077== at 0x10870A9C: __open_nocancel (open64_nocancel.c:39) ==40077== by 0x107F4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40077== by 0x6127822: ??? ==40077== by 0x612796F: ??? ==40077== by 0x155D76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40077== by 0x155D7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40077== by 0x1558D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40077== by 0x155322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40077== by 0x104B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40077== by 0x10452D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40077== by 0x6277D38: PetscInitialize (pinit.c:924) ==40077== by 0x1039BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40077== by 0x1039BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40077== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40077== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40077== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40077== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40077== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40077== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40077== ==40077== Open file descriptor 145: ==40077== ==40077== ==40077== Open file descriptor 142: ==40077== ==40077== ==40077== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestWntCellCycleOdeSystem_valgrind.txt ==40077== ==40077== ==40077== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40077== ==40077== ==40077== ==40077== HEAP SUMMARY: ==40077== in use at exit: 36,669 bytes in 310 blocks ==40077== total heap usage: 169,330 allocs, 169,020 frees, 88,875,218 bytes allocated ==40077== ==40077== LEAK SUMMARY: ==40077== definitely lost: 0 bytes in 0 blocks ==40077== indirectly lost: 0 bytes in 0 blocks ==40077== possibly lost: 0 bytes in 0 blocks ==40077== still reachable: 24 bytes in 2 blocks ==40077== suppressed: 36,645 bytes in 308 blocks ==40077== Reachable blocks (those to which a pointer was found) are not shown. ==40077== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40077== ==40077== For lists of detected and suppressed errors, rerun with: -s ==40077== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)