==26038== Memcheck, a memory error detector ==26038== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26038== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26038== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26038== Parent PID: 24143 ==26038== ==26038== ==26038== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26038== Open file descriptor 12: ==26038== at 0xF85C0FD: pipe (pipe.c:29) ==26038== by 0x196D307D: ??? ==26038== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26038== by 0x10156418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26038== by 0x100EFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26038== by 0x1029BD38: PetscInitialize (pinit.c:924) ==26038== by 0xF11AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26038== by 0xF11AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26038== by 0x165480: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26038== by 0x15DC09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26038== by 0x160DD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26038== by 0x160C78: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26038== by 0x16130F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26038== by 0x15C025: main (TestCaBasedCellPopulation.cpp:19) ==26038== ==26038== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26038== at 0xF860A9C: __open_nocancel (open64_nocancel.c:39) ==26038== by 0xF7E4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26038== by 0xF15D822: ??? ==26038== by 0xF15D96F: ??? ==26038== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26038== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26038== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26038== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26038== by 0x10156418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26038== by 0x100EFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26038== by 0x1029BD38: PetscInitialize (pinit.c:924) ==26038== by 0xF11AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26038== by 0xF11AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26038== by 0x165480: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26038== by 0x15DC09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26038== by 0x160DD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26038== by 0x160C78: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26038== by 0x16130F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26038== by 0x15C025: main (TestCaBasedCellPopulation.cpp:19) ==26038== ==26038== Open file descriptor 145: ==26038== ==26038== ==26038== Open file descriptor 142: ==26038== ==26038== ==26038== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==26038== ==26038== ==26038== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26038== ==26038== ==26038== ==26038== HEAP SUMMARY: ==26038== in use at exit: 35,215 bytes in 290 blocks ==26038== total heap usage: 59,656 allocs, 59,366 frees, 16,292,774 bytes allocated ==26038== ==26038== LEAK SUMMARY: ==26038== definitely lost: 0 bytes in 0 blocks ==26038== indirectly lost: 0 bytes in 0 blocks ==26038== possibly lost: 0 bytes in 0 blocks ==26038== still reachable: 56 bytes in 3 blocks ==26038== suppressed: 35,159 bytes in 287 blocks ==26038== Reachable blocks (those to which a pointer was found) are not shown. ==26038== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26038== ==26038== For lists of detected and suppressed errors, rerun with: -s ==26038== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)