==25929== Memcheck, a memory error detector ==25929== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25929== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25929== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==25929== Parent PID: 24118 ==25929== ==25929== ==25929== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25929== Open file descriptor 12: ==25929== at 0xF0AF0FD: pipe (pipe.c:29) ==25929== by 0x196D407D: ??? ==25929== by 0x13C6E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25929== by 0xECFC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25929== by 0xEC95D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25929== by 0xD98CD38: PetscInitialize (pinit.c:924) ==25929== by 0xD4B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25929== by 0xD4B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25929== by 0x132ACB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25929== by 0x12BEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25929== by 0x12EA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25929== by 0x12E933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25929== by 0x12EF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25929== by 0x12A6E5: main (TestCaUpdateRules.cpp:18) ==25929== ==25929== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25929== at 0xF0B3A9C: __open_nocancel (open64_nocancel.c:39) ==25929== by 0xF037BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25929== by 0xD4F7822: ??? ==25929== by 0xD4F796F: ??? ==25929== by 0x13D136DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25929== by 0x13D13938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25929== by 0x13CC9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25929== by 0x13C6E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25929== by 0xECFC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25929== by 0xEC95D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25929== by 0xD98CD38: PetscInitialize (pinit.c:924) ==25929== by 0xD4B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25929== by 0xD4B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25929== by 0x132ACB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25929== by 0x12BEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25929== by 0x12EA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25929== by 0x12E933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25929== by 0x12EF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25929== by 0x12A6E5: main (TestCaUpdateRules.cpp:18) ==25929== ==25929== Open file descriptor 145: ==25929== ==25929== ==25929== Open file descriptor 142: ==25929== ==25929== ==25929== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==25929== ==25929== ==25929== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25929== ==25929== ==25929== ==25929== HEAP SUMMARY: ==25929== in use at exit: 35,215 bytes in 290 blocks ==25929== total heap usage: 39,550 allocs, 39,260 frees, 8,115,672 bytes allocated ==25929== ==25929== LEAK SUMMARY: ==25929== definitely lost: 0 bytes in 0 blocks ==25929== indirectly lost: 0 bytes in 0 blocks ==25929== possibly lost: 0 bytes in 0 blocks ==25929== still reachable: 56 bytes in 3 blocks ==25929== suppressed: 35,159 bytes in 287 blocks ==25929== Reachable blocks (those to which a pointer was found) are not shown. ==25929== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25929== ==25929== For lists of detected and suppressed errors, rerun with: -s ==25929== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)