==40812== Memcheck, a memory error detector ==40812== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40812== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40812== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainDistributedMesh -malloc_debug -malloc_dump -memory_info ==40812== Parent PID: 23909 ==40812== ==40812== ==40812== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40812== Open file descriptor 12: ==40812== at 0xBC360FD: pipe (pipe.c:29) ==40812== by 0x1435C07D: ??? ==40812== by 0xFB1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40812== by 0xB53E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40812== by 0xB4D7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40812== by 0x8205D38: PetscInitialize (pinit.c:924) ==40812== by 0xB3E3E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40812== by 0xB3E3EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40812== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40812== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40812== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40812== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40812== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40812== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==40812== ==40812== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40812== at 0xBC3AA9C: __open_nocancel (open64_nocancel.c:39) ==40812== by 0xBBBEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40812== by 0xB426822: ??? ==40812== by 0xB42696F: ??? ==40812== by 0xFBC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40812== by 0xFBC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40812== by 0xFB79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40812== by 0xFB1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40812== by 0xB53E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40812== by 0xB4D7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40812== by 0x8205D38: PetscInitialize (pinit.c:924) ==40812== by 0xB3E3E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40812== by 0xB3E3EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40812== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40812== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40812== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40812== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40812== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40812== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==40812== ==40812== Open file descriptor 145: ==40812== ==40812== ==40812== Open file descriptor 142: ==40812== ==40812== ==40812== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainDistributedMesh_valgrind.txt ==40812== ==40812== ==40812== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40812== ==40812== ==40812== ==40812== HEAP SUMMARY: ==40812== in use at exit: 37,149 bytes in 320 blocks ==40812== total heap usage: 412,031 allocs, 411,711 frees, 106,347,013 bytes allocated ==40812== ==40812== LEAK SUMMARY: ==40812== definitely lost: 0 bytes in 0 blocks ==40812== indirectly lost: 0 bytes in 0 blocks ==40812== possibly lost: 0 bytes in 0 blocks ==40812== still reachable: 24 bytes in 2 blocks ==40812== suppressed: 37,125 bytes in 318 blocks ==40812== Reachable blocks (those to which a pointer was found) are not shown. ==40812== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40812== ==40812== For lists of detected and suppressed errors, rerun with: -s ==40812== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 52 from 35)