==40838== Memcheck, a memory error detector ==40838== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40838== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40838== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithBathProblem -malloc_debug -malloc_dump -memory_info ==40838== Parent PID: 23909 ==40838== ==40838== ==40838== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40838== Open file descriptor 12: ==40838== at 0xAC940FD: pipe (pipe.c:29) ==40838== by 0x1435C07D: ??? ==40838== by 0xD99D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40838== by 0xB062418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40838== by 0xAFFBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40838== by 0xB53DD38: PetscInitialize (pinit.c:924) ==40838== by 0xA491E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40838== by 0xA491EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40838== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40838== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40838== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40838== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40838== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40838== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==40838== ==40838== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40838== at 0xAC98A9C: __open_nocancel (open64_nocancel.c:39) ==40838== by 0xAC1CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40838== by 0xA4D4822: ??? ==40838== by 0xA4D496F: ??? ==40838== by 0xDA426DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40838== by 0xDA42938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40838== by 0xD9F8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40838== by 0xD99D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40838== by 0xB062418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40838== by 0xAFFBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40838== by 0xB53DD38: PetscInitialize (pinit.c:924) ==40838== by 0xA491E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40838== by 0xA491EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40838== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40838== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40838== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40838== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40838== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40838== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==40838== ==40838== Open file descriptor 145: ==40838== ==40838== ==40838== Open file descriptor 142: ==40838== ==40838== ==40838== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithBathProblem_valgrind.txt ==40838== ==40838== ==40838== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40838== ==40838== ==40838== ==40838== HEAP SUMMARY: ==40838== in use at exit: 37,076 bytes in 316 blocks ==40838== total heap usage: 1,378,052 allocs, 1,377,736 frees, 656,523,640 bytes allocated ==40838== ==40838== LEAK SUMMARY: ==40838== definitely lost: 0 bytes in 0 blocks ==40838== indirectly lost: 0 bytes in 0 blocks ==40838== possibly lost: 0 bytes in 0 blocks ==40838== still reachable: 24 bytes in 2 blocks ==40838== suppressed: 37,052 bytes in 314 blocks ==40838== Reachable blocks (those to which a pointer was found) are not shown. ==40838== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40838== ==40838== For lists of detected and suppressed errors, rerun with: -s ==40838== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 66 from 31)