==25231== Memcheck, a memory error detector ==25231== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25231== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25231== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==25231== Parent PID: 23909 ==25231== ==25231== ==25231== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25231== Open file descriptor 12: ==25231== at 0xEFAF0FD: pipe (pipe.c:29) ==25231== by 0x196D807D: ??? ==25231== by 0x13C754CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25231== by 0xEBFC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25231== by 0xEB95D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25231== by 0xD88CD38: PetscInitialize (pinit.c:924) ==25231== by 0xD6FBE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25231== by 0xD6FBEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25231== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25231== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25231== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25231== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25231== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25231== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25231== ==25231== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25231== at 0xEFB3A9C: __open_nocancel (open64_nocancel.c:39) ==25231== by 0xEF37BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25231== by 0xD73E822: ??? ==25231== by 0xD73E96F: ??? ==25231== by 0x13D1A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25231== by 0x13D1A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25231== by 0x13CD0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25231== by 0x13C752DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25231== by 0xEBFC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25231== by 0xEB95D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25231== by 0xD88CD38: PetscInitialize (pinit.c:924) ==25231== by 0xD6FBE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25231== by 0xD6FBEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25231== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25231== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25231== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25231== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25231== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25231== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25231== ==25231== Open file descriptor 145: ==25231== ==25231== ==25231== Open file descriptor 142: ==25231== ==25231== ==25231== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==25231== ==25231== ==25231== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25231== ==25231== ==25231== ==25231== HEAP SUMMARY: ==25231== in use at exit: 36,685 bytes in 311 blocks ==25231== total heap usage: 531,150 allocs, 530,839 frees, 13,710,455 bytes allocated ==25231== ==25231== LEAK SUMMARY: ==25231== definitely lost: 0 bytes in 0 blocks ==25231== indirectly lost: 0 bytes in 0 blocks ==25231== possibly lost: 0 bytes in 0 blocks ==25231== still reachable: 56 bytes in 3 blocks ==25231== suppressed: 36,629 bytes in 308 blocks ==25231== Reachable blocks (those to which a pointer was found) are not shown. ==25231== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25231== ==25231== For lists of detected and suppressed errors, rerun with: -s ==25231== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)