==25736== Memcheck, a memory error detector ==25736== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25736== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25736== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellwiseDataGradient -malloc_debug -malloc_dump -memory_info ==25736== Parent PID: 23909 ==25736== ==25736== ==25736== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25736== Open file descriptor 12: ==25736== at 0xF81D0FD: pipe (pipe.c:29) ==25736== by 0x196D807D: ??? ==25736== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25736== by 0x10115418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25736== by 0x100AED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25736== by 0x1029ED38: PetscInitialize (pinit.c:924) ==25736== by 0xF11DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25736== by 0xF11DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25736== by 0x11DD52: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25736== by 0x119493: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25736== by 0x11B86C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25736== by 0x11B767: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25736== by 0x11BD7B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25736== by 0x117C95: main (TestCellwiseDataGradient.cpp:18) ==25736== ==25736== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25736== at 0xF821A9C: __open_nocancel (open64_nocancel.c:39) ==25736== by 0xF7A5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25736== by 0xF160822: ??? ==25736== by 0xF16096F: ??? ==25736== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25736== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25736== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25736== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25736== by 0x10115418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25736== by 0x100AED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25736== by 0x1029ED38: PetscInitialize (pinit.c:924) ==25736== by 0xF11DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25736== by 0xF11DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25736== by 0x11DD52: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25736== by 0x119493: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25736== by 0x11B86C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25736== by 0x11B767: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25736== by 0x11BD7B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25736== by 0x117C95: main (TestCellwiseDataGradient.cpp:18) ==25736== ==25736== Open file descriptor 145: ==25736== ==25736== ==25736== Open file descriptor 142: ==25736== ==25736== ==25736== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellwiseDataGradient_valgrind.txt ==25736== ==25736== ==25736== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25736== ==25736== ==25736== ==25736== HEAP SUMMARY: ==25736== in use at exit: 36,685 bytes in 311 blocks ==25736== total heap usage: 408,837 allocs, 408,526 frees, 23,119,598 bytes allocated ==25736== ==25736== LEAK SUMMARY: ==25736== definitely lost: 0 bytes in 0 blocks ==25736== indirectly lost: 0 bytes in 0 blocks ==25736== possibly lost: 0 bytes in 0 blocks ==25736== still reachable: 56 bytes in 3 blocks ==25736== suppressed: 36,629 bytes in 308 blocks ==25736== Reachable blocks (those to which a pointer was found) are not shown. ==25736== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25736== ==25736== For lists of detected and suppressed errors, rerun with: -s ==25736== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)