==39610== Memcheck, a memory error detector ==39610== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39610== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39610== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==39610== Parent PID: 23909 ==39610== ==39610== ==39610== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39610== Open file descriptor 12: ==39610== at 0x1103F0FD: pipe (pipe.c:29) ==39610== by 0x196D707D: ??? ==39610== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39610== by 0x10BA5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39610== by 0x10B3ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39610== by 0xF835D38: PetscInitialize (pinit.c:924) ==39610== by 0xF35FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39610== by 0xF35FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39610== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39610== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39610== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39610== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39610== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39610== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==39610== ==39610== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39610== at 0x11043A9C: __open_nocancel (open64_nocancel.c:39) ==39610== by 0x10FC7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39610== by 0xF3A2822: ??? ==39610== by 0xF3A296F: ??? ==39610== by 0x14D866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39610== by 0x14D86938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39610== by 0x14D3C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39610== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39610== by 0x10BA5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39610== by 0x10B3ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39610== by 0xF835D38: PetscInitialize (pinit.c:924) ==39610== by 0xF35FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39610== by 0xF35FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39610== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39610== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39610== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39610== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39610== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39610== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==39610== ==39610== Open file descriptor 145: ==39610== ==39610== ==39610== Open file descriptor 142: ==39610== ==39610== ==39610== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==39610== ==39610== ==39610== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39610== ==39610== ==39610== ==39610== HEAP SUMMARY: ==39610== in use at exit: 36,612 bytes in 307 blocks ==39610== total heap usage: 3,801,247 allocs, 3,800,940 frees, 178,450,596 bytes allocated ==39610== ==39610== LEAK SUMMARY: ==39610== definitely lost: 0 bytes in 0 blocks ==39610== indirectly lost: 0 bytes in 0 blocks ==39610== possibly lost: 0 bytes in 0 blocks ==39610== still reachable: 56 bytes in 3 blocks ==39610== suppressed: 36,556 bytes in 304 blocks ==39610== Reachable blocks (those to which a pointer was found) are not shown. ==39610== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39610== ==39610== For lists of detected and suppressed errors, rerun with: -s ==39610== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)