==25649== Memcheck, a memory error detector ==25649== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25649== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25649== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestGoldbeter1991OdeSystem -malloc_debug -malloc_dump -memory_info ==25649== Parent PID: 23909 ==25649== ==25649== ==25649== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25649== Open file descriptor 12: ==25649== at 0xEFAF0FD: pipe (pipe.c:29) ==25649== by 0x196D807D: ??? ==25649== by 0x13C754CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25649== by 0xEBFC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25649== by 0xEB95D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25649== by 0xD88CD38: PetscInitialize (pinit.c:924) ==25649== by 0xD6FBE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25649== by 0xD6FBEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25649== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25649== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25649== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25649== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25649== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25649== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==25649== ==25649== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25649== at 0xEFB3A9C: __open_nocancel (open64_nocancel.c:39) ==25649== by 0xEF37BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25649== by 0xD73E822: ??? ==25649== by 0xD73E96F: ??? ==25649== by 0x13D1A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25649== by 0x13D1A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25649== by 0x13CD0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25649== by 0x13C752DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25649== by 0xEBFC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25649== by 0xEB95D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25649== by 0xD88CD38: PetscInitialize (pinit.c:924) ==25649== by 0xD6FBE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25649== by 0xD6FBEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25649== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25649== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25649== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25649== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25649== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25649== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==25649== ==25649== Open file descriptor 145: ==25649== ==25649== ==25649== Open file descriptor 142: ==25649== ==25649== ==25649== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGoldbeter1991OdeSystem_valgrind.txt ==25649== ==25649== ==25649== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25649== ==25649== ==25649== ==25649== HEAP SUMMARY: ==25649== in use at exit: 36,653 bytes in 310 blocks ==25649== total heap usage: 46,968 allocs, 46,658 frees, 8,912,610 bytes allocated ==25649== ==25649== LEAK SUMMARY: ==25649== definitely lost: 0 bytes in 0 blocks ==25649== indirectly lost: 0 bytes in 0 blocks ==25649== possibly lost: 0 bytes in 0 blocks ==25649== still reachable: 24 bytes in 2 blocks ==25649== suppressed: 36,629 bytes in 308 blocks ==25649== Reachable blocks (those to which a pointer was found) are not shown. ==25649== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25649== ==25649== For lists of detected and suppressed errors, rerun with: -s ==25649== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)