==41361== Memcheck, a memory error detector ==41361== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41361== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41361== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==41361== Parent PID: 23909 ==41361== ==41361== ==41361== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41361== Open file descriptor 12: ==41361== at 0x85940FD: pipe (pipe.c:29) ==41361== by 0x1435D07D: ??? ==41361== by 0xC8CF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41361== by 0x8962418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41361== by 0x88FBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41361== by 0x8E3DD38: PetscInitialize (pinit.c:924) ==41361== by 0x81BDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41361== by 0x81BDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41361== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41361== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41361== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41361== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41361== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41361== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==41361== ==41361== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41361== at 0x8598A9C: __open_nocancel (open64_nocancel.c:39) ==41361== by 0x851CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41361== by 0x8200822: ??? ==41361== by 0x820096F: ??? ==41361== by 0xC9746DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41361== by 0xC974938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41361== by 0xC92A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41361== by 0xC8CF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41361== by 0x8962418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41361== by 0x88FBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41361== by 0x8E3DD38: PetscInitialize (pinit.c:924) ==41361== by 0x81BDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41361== by 0x81BDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41361== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41361== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41361== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41361== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41361== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41361== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==41361== ==41361== Open file descriptor 145: ==41361== ==41361== ==41361== Open file descriptor 142: ==41361== ==41361== ==41361== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==41361== ==41361== ==41361== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41361== ==41361== ==41361== ==41361== HEAP SUMMARY: ==41361== in use at exit: 36,669 bytes in 310 blocks ==41361== total heap usage: 32,779 allocs, 32,469 frees, 7,487,508 bytes allocated ==41361== ==41361== LEAK SUMMARY: ==41361== definitely lost: 0 bytes in 0 blocks ==41361== indirectly lost: 0 bytes in 0 blocks ==41361== possibly lost: 0 bytes in 0 blocks ==41361== still reachable: 24 bytes in 2 blocks ==41361== suppressed: 36,645 bytes in 308 blocks ==41361== Reachable blocks (those to which a pointer was found) are not shown. ==41361== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41361== ==41361== For lists of detected and suppressed errors, rerun with: -s ==41361== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)