==40708== Memcheck, a memory error detector ==40708== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40708== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40708== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMajorAirwaysCentreLinesCleaner -malloc_debug -malloc_dump -memory_info ==40708== Parent PID: 23909 ==40708== ==40708== ==40708== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40708== Open file descriptor 12: ==40708== at 0x82410FD: pipe (pipe.c:29) ==40708== by 0x107C307D: ??? ==40708== by 0xBD014CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40708== by 0x7B49418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40708== by 0x7AE2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40708== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40708== by 0x7A08E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40708== by 0x7A08EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40708== by 0x11675D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40708== by 0x1121F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40708== by 0x1146F0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40708== by 0x1145EB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40708== by 0x114BFF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40708== by 0x1109F5: main (TestMajorAirwaysCentreLinesCleaner.cpp:18) ==40708== ==40708== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40708== at 0x8245A9C: __open_nocancel (open64_nocancel.c:39) ==40708== by 0x81C9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40708== by 0x7A4B822: ??? ==40708== by 0x7A4B96F: ??? ==40708== by 0xBDA66DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40708== by 0xBDA6938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40708== by 0xBD5C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40708== by 0xBD012DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40708== by 0x7B49418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40708== by 0x7AE2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40708== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40708== by 0x7A08E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40708== by 0x7A08EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40708== by 0x11675D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40708== by 0x1121F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40708== by 0x1146F0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40708== by 0x1145EB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40708== by 0x114BFF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40708== by 0x1109F5: main (TestMajorAirwaysCentreLinesCleaner.cpp:18) ==40708== ==40708== Open file descriptor 145: ==40708== ==40708== ==40708== Open file descriptor 142: ==40708== ==40708== ==40708== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMajorAirwaysCentreLinesCleaner_valgrind.txt ==40708== ==40708== ==40708== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40708== ==40708== ==40708== ==40708== HEAP SUMMARY: ==40708== in use at exit: 36,653 bytes in 310 blocks ==40708== total heap usage: 477,122 allocs, 476,812 frees, 26,202,062 bytes allocated ==40708== ==40708== LEAK SUMMARY: ==40708== definitely lost: 0 bytes in 0 blocks ==40708== indirectly lost: 0 bytes in 0 blocks ==40708== possibly lost: 0 bytes in 0 blocks ==40708== still reachable: 24 bytes in 2 blocks ==40708== suppressed: 36,629 bytes in 308 blocks ==40708== Reachable blocks (those to which a pointer was found) are not shown. ==40708== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40708== ==40708== For lists of detected and suppressed errors, rerun with: -s ==40708== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)