==26313== Memcheck, a memory error detector ==26313== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26313== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26313== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithBuskeForces -malloc_debug -malloc_dump -memory_info ==26313== Parent PID: 23909 ==26313== ==26313== ==26313== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26313== Open file descriptor 12: ==26313== at 0xF9040FD: pipe (pipe.c:29) ==26313== by 0x196D807D: ??? ==26313== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26313== by 0x101FE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26313== by 0x10197D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26313== by 0x10385D38: PetscInitialize (pinit.c:924) ==26313== by 0xF11DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26313== by 0xF11DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26313== by 0x1241FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26313== by 0x11F593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26313== by 0x121AD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26313== by 0x1219D3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26313== by 0x121FE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26313== by 0x11DD95: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==26313== ==26313== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26313== at 0xF908A9C: __open_nocancel (open64_nocancel.c:39) ==26313== by 0xF88CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26313== by 0xF160822: ??? ==26313== by 0xF16096F: ??? ==26313== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26313== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26313== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26313== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26313== by 0x101FE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26313== by 0x10197D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26313== by 0x10385D38: PetscInitialize (pinit.c:924) ==26313== by 0xF11DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26313== by 0xF11DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26313== by 0x1241FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26313== by 0x11F593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26313== by 0x121AD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26313== by 0x1219D3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26313== by 0x121FE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26313== by 0x11DD95: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==26313== ==26313== Open file descriptor 145: ==26313== ==26313== ==26313== Open file descriptor 142: ==26313== ==26313== ==26313== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithBuskeForces_valgrind.txt ==26313== ==26313== ==26313== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26313== ==26313== ==26313== ==26313== HEAP SUMMARY: ==26313== in use at exit: 36,612 bytes in 307 blocks ==26313== total heap usage: 3,720,633 allocs, 3,720,326 frees, 3,156,111,175 bytes allocated ==26313== ==26313== LEAK SUMMARY: ==26313== definitely lost: 0 bytes in 0 blocks ==26313== indirectly lost: 0 bytes in 0 blocks ==26313== possibly lost: 0 bytes in 0 blocks ==26313== still reachable: 56 bytes in 3 blocks ==26313== suppressed: 36,556 bytes in 304 blocks ==26313== Reachable blocks (those to which a pointer was found) are not shown. ==26313== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26313== ==26313== For lists of detected and suppressed errors, rerun with: -s ==26313== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)