==25397== Memcheck, a memory error detector ==25397== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25397== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25397== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25397== Parent PID: 23909 ==25397== ==25397== ==25397== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25397== Open file descriptor 12: ==25397== at 0x110710FD: pipe (pipe.c:29) ==25397== by 0x196D707D: ??? ==25397== by 0x14C924CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25397== by 0x10CBE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25397== by 0x10C57D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25397== by 0xF94ED38: PetscInitialize (pinit.c:924) ==25397== by 0xF4BAE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25397== by 0xF4BAEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25397== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25397== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25397== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25397== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25397== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25397== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==25397== ==25397== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25397== at 0x11075A9C: __open_nocancel (open64_nocancel.c:39) ==25397== by 0x10FF9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25397== by 0xF4FD822: ??? ==25397== by 0xF4FD96F: ??? ==25397== by 0x14D376DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25397== by 0x14D37938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25397== by 0x14CED922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25397== by 0x14C922DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25397== by 0x10CBE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25397== by 0x10C57D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25397== by 0xF94ED38: PetscInitialize (pinit.c:924) ==25397== by 0xF4BAE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25397== by 0xF4BAEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25397== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25397== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25397== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25397== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25397== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25397== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==25397== ==25397== Open file descriptor 145: ==25397== ==25397== ==25397== Open file descriptor 142: ==25397== ==25397== ==25397== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==25397== ==25397== ==25397== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25397== ==25397== ==25397== ==25397== HEAP SUMMARY: ==25397== in use at exit: 36,612 bytes in 307 blocks ==25397== total heap usage: 7,849,949 allocs, 7,849,642 frees, 857,819,311 bytes allocated ==25397== ==25397== LEAK SUMMARY: ==25397== definitely lost: 0 bytes in 0 blocks ==25397== indirectly lost: 0 bytes in 0 blocks ==25397== possibly lost: 0 bytes in 0 blocks ==25397== still reachable: 56 bytes in 3 blocks ==25397== suppressed: 36,556 bytes in 304 blocks ==25397== Reachable blocks (those to which a pointer was found) are not shown. ==25397== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25397== ==25397== For lists of detected and suppressed errors, rerun with: -s ==25397== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)