==39965== Memcheck, a memory error detector ==39965== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39965== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39965== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestWntConcentration -malloc_debug -malloc_dump -memory_info ==39965== Parent PID: 23909 ==39965== ==39965== ==39965== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39965== Open file descriptor 12: ==39965== at 0x126BD0FD: pipe (pipe.c:29) ==39965== by 0x1B39907D: ??? ==39965== by 0x164FD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39965== by 0x11EDE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39965== by 0x11E77D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39965== by 0x6277D38: PetscInitialize (pinit.c:924) ==39965== by 0x11DC0E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39965== by 0x11DC0EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39965== by 0x1449F9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39965== by 0x13F449: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39965== by 0x14225A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39965== by 0x1420FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39965== by 0x142791: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39965== by 0x13D865: main (TestWntConcentration.cpp:19) ==39965== ==39965== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39965== at 0x126C1A9C: __open_nocancel (open64_nocancel.c:39) ==39965== by 0x12645BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39965== by 0x6127822: ??? ==39965== by 0x612796F: ??? ==39965== by 0x165A26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39965== by 0x165A2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39965== by 0x16558922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39965== by 0x164FD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39965== by 0x11EDE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39965== by 0x11E77D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39965== by 0x6277D38: PetscInitialize (pinit.c:924) ==39965== by 0x11DC0E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39965== by 0x11DC0EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39965== by 0x1449F9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39965== by 0x13F449: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39965== by 0x14225A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39965== by 0x1420FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39965== by 0x142791: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39965== by 0x13D865: main (TestWntConcentration.cpp:19) ==39965== ==39965== Open file descriptor 145: ==39965== ==39965== ==39965== Open file descriptor 142: ==39965== ==39965== ==39965== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestWntConcentration_valgrind.txt ==39965== ==39965== ==39965== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39965== ==39965== ==39965== ==39965== HEAP SUMMARY: ==39965== in use at exit: 36,781 bytes in 312 blocks ==39965== total heap usage: 40,489 allocs, 40,177 frees, 9,137,571 bytes allocated ==39965== ==39965== LEAK SUMMARY: ==39965== definitely lost: 0 bytes in 0 blocks ==39965== indirectly lost: 0 bytes in 0 blocks ==39965== possibly lost: 0 bytes in 0 blocks ==39965== still reachable: 136 bytes in 4 blocks ==39965== suppressed: 36,645 bytes in 308 blocks ==39965== Reachable blocks (those to which a pointer was found) are not shown. ==39965== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39965== ==39965== For lists of detected and suppressed errors, rerun with: -s ==39965== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)