==25564== Memcheck, a memory error detector ==25564== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25564== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25564== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25564== Parent PID: 24077 ==25564== ==25564== ==25564== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25564== Open file descriptor 12: ==25564== at 0x110B30FD: pipe (pipe.c:29) ==25564== by 0x196D707D: ??? ==25564== by 0x14C924CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25564== by 0x10D00418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25564== by 0x10C99D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25564== by 0xF990D38: PetscInitialize (pinit.c:924) ==25564== by 0xF4BAE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25564== by 0xF4BAEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25564== by 0x13CB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25564== by 0x137563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25564== by 0x13A174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25564== by 0x13A06F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25564== by 0x13A683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25564== by 0x135D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25564== ==25564== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25564== at 0x110B7A9C: __open_nocancel (open64_nocancel.c:39) ==25564== by 0x1103BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25564== by 0xF4FD822: ??? ==25564== by 0xF4FD96F: ??? ==25564== by 0x14D376DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25564== by 0x14D37938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25564== by 0x14CED922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25564== by 0x14C922DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25564== by 0x10D00418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25564== by 0x10C99D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25564== by 0xF990D38: PetscInitialize (pinit.c:924) ==25564== by 0xF4BAE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25564== by 0xF4BAEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25564== by 0x13CB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25564== by 0x137563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25564== by 0x13A174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25564== by 0x13A06F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25564== by 0x13A683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25564== by 0x135D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25564== ==25564== Open file descriptor 145: ==25564== ==25564== ==25564== Open file descriptor 142: ==25564== ==25564== ==25564== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestEllipticBoxDomainPdeModifier_valgrind.txt ==25564== ==25564== ==25564== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25564== ==25564== ==25564== ==25564== HEAP SUMMARY: ==25564== in use at exit: 35,142 bytes in 286 blocks ==25564== total heap usage: 5,618,670 allocs, 5,618,384 frees, 601,669,319 bytes allocated ==25564== ==25564== LEAK SUMMARY: ==25564== definitely lost: 0 bytes in 0 blocks ==25564== indirectly lost: 0 bytes in 0 blocks ==25564== possibly lost: 0 bytes in 0 blocks ==25564== still reachable: 56 bytes in 3 blocks ==25564== suppressed: 35,086 bytes in 283 blocks ==25564== Reachable blocks (those to which a pointer was found) are not shown. ==25564== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25564== ==25564== For lists of detected and suppressed errors, rerun with: -s ==25564== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)