==40394== Memcheck, a memory error detector ==40394== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40394== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40394== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestWntCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==40394== Parent PID: 24077 ==40394== ==40394== ==40394== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40394== Open file descriptor 12: ==40394== at 0x1086F0FD: pipe (pipe.c:29) ==40394== by 0x1B39A07D: ??? ==40394== by 0x155354CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40394== by 0x104BC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40394== by 0x10455D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40394== by 0x6277D38: PetscInitialize (pinit.c:924) ==40394== by 0x1039EE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40394== by 0x1039EEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40394== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40394== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40394== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40394== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40394== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40394== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40394== ==40394== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40394== at 0x10873A9C: __open_nocancel (open64_nocancel.c:39) ==40394== by 0x107F7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40394== by 0x6127822: ??? ==40394== by 0x612796F: ??? ==40394== by 0x155DA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40394== by 0x155DA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40394== by 0x15590922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40394== by 0x155352DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40394== by 0x104BC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40394== by 0x10455D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40394== by 0x6277D38: PetscInitialize (pinit.c:924) ==40394== by 0x1039EE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40394== by 0x1039EEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40394== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40394== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40394== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40394== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40394== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40394== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40394== ==40394== Open file descriptor 145: ==40394== ==40394== ==40394== Open file descriptor 142: ==40394== ==40394== ==40394== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestWntCellCycleOdeSystem_valgrind.txt ==40394== ==40394== ==40394== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40394== ==40394== ==40394== ==40394== HEAP SUMMARY: ==40394== in use at exit: 35,199 bytes in 289 blocks ==40394== total heap usage: 169,375 allocs, 169,086 frees, 88,838,507 bytes allocated ==40394== ==40394== LEAK SUMMARY: ==40394== definitely lost: 0 bytes in 0 blocks ==40394== indirectly lost: 0 bytes in 0 blocks ==40394== possibly lost: 0 bytes in 0 blocks ==40394== still reachable: 24 bytes in 2 blocks ==40394== suppressed: 35,175 bytes in 287 blocks ==40394== Reachable blocks (those to which a pointer was found) are not shown. ==40394== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40394== ==40394== For lists of detected and suppressed errors, rerun with: -s ==40394== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)