==40972== Memcheck, a memory error detector ==40972== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40972== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40972== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithBathProblem -malloc_debug -malloc_dump -memory_info ==40972== Parent PID: 24074 ==40972== ==40972== ==40972== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40972== Open file descriptor 12: ==40972== at 0xAC9A0FD: pipe (pipe.c:29) ==40972== by 0x1436207D: ??? ==40972== by 0xD99D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40972== by 0xB068418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40972== by 0xB001D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40972== by 0xB543D38: PetscInitialize (pinit.c:924) ==40972== by 0xA497E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40972== by 0xA497EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40972== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40972== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40972== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40972== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40972== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40972== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==40972== ==40972== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40972== at 0xAC9EA9C: __open_nocancel (open64_nocancel.c:39) ==40972== by 0xAC22BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40972== by 0xA4DA822: ??? ==40972== by 0xA4DA96F: ??? ==40972== by 0xDA426DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40972== by 0xDA42938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40972== by 0xD9F8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40972== by 0xD99D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40972== by 0xB068418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40972== by 0xB001D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40972== by 0xB543D38: PetscInitialize (pinit.c:924) ==40972== by 0xA497E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40972== by 0xA497EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40972== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40972== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40972== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40972== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40972== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40972== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==40972== ==40972== Open file descriptor 145: ==40972== ==40972== ==40972== Open file descriptor 142: ==40972== ==40972== ==40972== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithBathProblem_valgrind.txt ==40972== ==40972== ==40972== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40972== ==40972== ==40972== ==40972== HEAP SUMMARY: ==40972== in use at exit: 35,606 bytes in 295 blocks ==40972== total heap usage: 1,378,093 allocs, 1,377,798 frees, 656,486,031 bytes allocated ==40972== ==40972== LEAK SUMMARY: ==40972== definitely lost: 0 bytes in 0 blocks ==40972== indirectly lost: 0 bytes in 0 blocks ==40972== possibly lost: 0 bytes in 0 blocks ==40972== still reachable: 24 bytes in 2 blocks ==40972== suppressed: 35,582 bytes in 293 blocks ==40972== Reachable blocks (those to which a pointer was found) are not shown. ==40972== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40972== ==40972== For lists of detected and suppressed errors, rerun with: -s ==40972== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 66 from 31)