==40841== Memcheck, a memory error detector ==40841== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40841== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40841== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMultiLobeAirwayGenerator -malloc_debug -malloc_dump -memory_info ==40841== Parent PID: 24074 ==40841== ==40841== ==40841== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40841== Open file descriptor 12: ==40841== at 0x8D4A0FD: pipe (pipe.c:29) ==40841== by 0x107C807D: ??? ==40841== by 0xBE2C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40841== by 0x7B4E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40841== by 0x7AE7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40841== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40841== by 0x7A0DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40841== by 0x7A0DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40841== by 0x11A3B7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40841== by 0x11592D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40841== by 0x118434: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40841== by 0x1182D4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40841== by 0x11896B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40841== by 0x113D55: main (TestMultiLobeAirwayGenerator.cpp:19) ==40841== ==40841== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40841== at 0x8D4EA9C: __open_nocancel (open64_nocancel.c:39) ==40841== by 0x8CD2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40841== by 0x7A50822: ??? ==40841== by 0x7A5096F: ??? ==40841== by 0xBED16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40841== by 0xBED1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40841== by 0xBE87922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40841== by 0xBE2C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40841== by 0x7B4E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40841== by 0x7AE7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40841== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40841== by 0x7A0DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40841== by 0x7A0DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40841== by 0x11A3B7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40841== by 0x11592D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40841== by 0x118434: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40841== by 0x1182D4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40841== by 0x11896B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40841== by 0x113D55: main (TestMultiLobeAirwayGenerator.cpp:19) ==40841== ==40841== Open file descriptor 145: ==40841== ==40841== ==40841== Open file descriptor 142: ==40841== ==40841== ==40841== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMultiLobeAirwayGenerator_valgrind.txt ==40841== ==40841== ==40841== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40841== ==40841== ==40841== ==40841== HEAP SUMMARY: ==40841== in use at exit: 35,183 bytes in 289 blocks ==40841== total heap usage: 105,083 allocs, 104,794 frees, 59,373,200 bytes allocated ==40841== ==40841== LEAK SUMMARY: ==40841== definitely lost: 0 bytes in 0 blocks ==40841== indirectly lost: 0 bytes in 0 blocks ==40841== possibly lost: 0 bytes in 0 blocks ==40841== still reachable: 24 bytes in 2 blocks ==40841== suppressed: 35,159 bytes in 287 blocks ==40841== Reachable blocks (those to which a pointer was found) are not shown. ==40841== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40841== ==40841== For lists of detected and suppressed errors, rerun with: -s ==40841== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)