==26745== Memcheck, a memory error detector ==26745== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26745== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26745== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d -malloc_debug -malloc_dump -memory_info ==26745== Parent PID: 24074 ==26745== ==26745== ==26745== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26745== Open file descriptor 12: ==26745== at 0xF9060FD: pipe (pipe.c:29) ==26745== by 0x196DA07D: ??? ==26745== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26745== by 0x10201418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26745== by 0x1019AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26745== by 0x10388D38: PetscInitialize (pinit.c:924) ==26745== by 0xF11FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26745== by 0xF11FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26745== by 0x13385A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26745== by 0x12E813: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26745== by 0x130FCC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26745== by 0x130EC7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26745== by 0x1314DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26745== by 0x12D015: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==26745== ==26745== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26745== at 0xF90AA9C: __open_nocancel (open64_nocancel.c:39) ==26745== by 0xF88EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26745== by 0xF162822: ??? ==26745== by 0xF16296F: ??? ==26745== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26745== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26745== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26745== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26745== by 0x10201418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26745== by 0x1019AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26745== by 0x10388D38: PetscInitialize (pinit.c:924) ==26745== by 0xF11FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26745== by 0xF11FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26745== by 0x13385A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26745== by 0x12E813: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26745== by 0x130FCC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26745== by 0x130EC7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26745== by 0x1314DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26745== by 0x12D015: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==26745== ==26745== Open file descriptor 145: ==26745== ==26745== ==26745== Open file descriptor 142: ==26745== ==26745== ==26745== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d_valgrind.txt ==26745== ==26745== ==26745== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26745== ==26745== ==26745== ==26745== HEAP SUMMARY: ==26745== in use at exit: 35,142 bytes in 286 blocks ==26745== total heap usage: 7,110,775 allocs, 7,110,489 frees, 7,708,867,718 bytes allocated ==26745== ==26745== LEAK SUMMARY: ==26745== definitely lost: 0 bytes in 0 blocks ==26745== indirectly lost: 0 bytes in 0 blocks ==26745== possibly lost: 0 bytes in 0 blocks ==26745== still reachable: 56 bytes in 3 blocks ==26745== suppressed: 35,086 bytes in 283 blocks ==26745== Reachable blocks (those to which a pointer was found) are not shown. ==26745== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26745== ==26745== For lists of detected and suppressed errors, rerun with: -s ==26745== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)