==40967== Memcheck, a memory error detector ==40967== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40967== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40967== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCellForCrypt -malloc_debug -malloc_dump -memory_info ==40967== Parent PID: 24067 ==40967== ==40967== ==40967== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40967== Open file descriptor 12: ==40967== at 0xF4760FD: pipe (pipe.c:29) ==40967== by 0x1B39E07D: ??? ==40967== by 0x144274CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40967== by 0x11B03418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40967== by 0x11A9CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40967== by 0x11C48D38: PetscInitialize (pinit.c:924) ==40967== by 0xED76E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40967== by 0xED76EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40967== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40967== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40967== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40967== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40967== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40967== by 0x118975: main (TestCellForCrypt.cpp:18) ==40967== ==40967== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40967== at 0xF47AA9C: __open_nocancel (open64_nocancel.c:39) ==40967== by 0xF3FEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40967== by 0xEDB9822: ??? ==40967== by 0xEDB996F: ??? ==40967== by 0x144CC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40967== by 0x144CC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40967== by 0x14482922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40967== by 0x144272DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40967== by 0x11B03418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40967== by 0x11A9CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40967== by 0x11C48D38: PetscInitialize (pinit.c:924) ==40967== by 0xED76E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40967== by 0xED76EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40967== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40967== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40967== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40967== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40967== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40967== by 0x118975: main (TestCellForCrypt.cpp:18) ==40967== ==40967== Open file descriptor 145: ==40967== ==40967== ==40967== Open file descriptor 142: ==40967== ==40967== ==40967== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellForCrypt_valgrind.txt ==40967== ==40967== ==40967== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40967== ==40967== ==40967== ==40967== HEAP SUMMARY: ==40967== in use at exit: 35,359 bytes in 291 blocks ==40967== total heap usage: 39,563 allocs, 39,272 frees, 8,113,743 bytes allocated ==40967== ==40967== LEAK SUMMARY: ==40967== definitely lost: 0 bytes in 0 blocks ==40967== indirectly lost: 0 bytes in 0 blocks ==40967== possibly lost: 0 bytes in 0 blocks ==40967== still reachable: 184 bytes in 4 blocks ==40967== suppressed: 35,175 bytes in 287 blocks ==40967== Reachable blocks (those to which a pointer was found) are not shown. ==40967== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40967== ==40967== For lists of detected and suppressed errors, rerun with: -s ==40967== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)