==40736== Memcheck, a memory error detector ==40736== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40736== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40736== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningImmersedBoundarySimulationsTutorial -malloc_debug -malloc_dump -memory_info ==40736== Parent PID: 24067 ==40736== ==40736== ==40736== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40736== Open file descriptor 12: ==40736== at 0x10CD60FD: pipe (pipe.c:29) ==40736== by 0x196DA07D: ??? ==40736== by 0x14C8A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40736== by 0x10923418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40736== by 0x108BCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40736== by 0xF5B3D38: PetscInitialize (pinit.c:924) ==40736== by 0xF11FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40736== by 0xF11FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40736== by 0x120CF3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40736== by 0x11C533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40736== by 0x11E8AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40736== by 0x11E7A7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40736== by 0x11EDBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40736== by 0x11AD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==40736== ==40736== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40736== at 0x10CDAA9C: __open_nocancel (open64_nocancel.c:39) ==40736== by 0x10C5EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40736== by 0xF162822: ??? ==40736== by 0xF16296F: ??? ==40736== by 0x14D2F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40736== by 0x14D2F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40736== by 0x14CE5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40736== by 0x14C8A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40736== by 0x10923418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40736== by 0x108BCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40736== by 0xF5B3D38: PetscInitialize (pinit.c:924) ==40736== by 0xF11FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40736== by 0xF11FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40736== by 0x120CF3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40736== by 0x11C533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40736== by 0x11E8AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40736== by 0x11E7A7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40736== by 0x11EDBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40736== by 0x11AD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==40736== ==40736== Open file descriptor 145: ==40736== ==40736== ==40736== Open file descriptor 142: ==40736== ==40736== ==40736== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningImmersedBoundarySimulationsTutorial_valgrind.txt ==40736== ==40736== ==40736== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40736== ==40736== ==40736== ==40736== HEAP SUMMARY: ==40736== in use at exit: 35,142 bytes in 286 blocks ==40736== total heap usage: 638,769 allocs, 638,483 frees, 181,775,211 bytes allocated ==40736== ==40736== LEAK SUMMARY: ==40736== definitely lost: 0 bytes in 0 blocks ==40736== indirectly lost: 0 bytes in 0 blocks ==40736== possibly lost: 0 bytes in 0 blocks ==40736== still reachable: 56 bytes in 3 blocks ==40736== suppressed: 35,086 bytes in 283 blocks ==40736== Reachable blocks (those to which a pointer was found) are not shown. ==40736== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40736== ==40736== For lists of detected and suppressed errors, rerun with: -s ==40736== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)