==25293== Memcheck, a memory error detector ==25293== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25293== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25293== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedCellProperties -malloc_debug -malloc_dump -memory_info ==25293== Parent PID: 24026 ==25293== ==25293== ==25293== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25293== Open file descriptor 12: ==25293== at 0xED680FD: pipe (pipe.c:29) ==25293== by 0x196DA07D: ??? ==25293== by 0x13C274CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25293== by 0xE9B7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25293== by 0xE950D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25293== by 0xD647D38: PetscInitialize (pinit.c:924) ==25293== by 0xD4B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25293== by 0xD4B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25293== by 0x12F18B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25293== by 0x129EE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25293== by 0x12CAE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25293== by 0x12C980: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25293== by 0x12D017: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25293== by 0x128305: main (TestCellBasedCellProperties.cpp:19) ==25293== ==25293== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25293== at 0xED6CA9C: __open_nocancel (open64_nocancel.c:39) ==25293== by 0xECF0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25293== by 0xD4F7822: ??? ==25293== by 0xD4F796F: ??? ==25293== by 0x13CCC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25293== by 0x13CCC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25293== by 0x13C82922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25293== by 0x13C272DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25293== by 0xE9B7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25293== by 0xE950D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25293== by 0xD647D38: PetscInitialize (pinit.c:924) ==25293== by 0xD4B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25293== by 0xD4B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25293== by 0x12F18B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25293== by 0x129EE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25293== by 0x12CAE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25293== by 0x12C980: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25293== by 0x12D017: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25293== by 0x128305: main (TestCellBasedCellProperties.cpp:19) ==25293== ==25293== Open file descriptor 145: ==25293== ==25293== ==25293== Open file descriptor 142: ==25293== ==25293== ==25293== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedCellProperties_valgrind.txt ==25293== ==25293== ==25293== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25293== ==25293== ==25293== ==25293== HEAP SUMMARY: ==25293== in use at exit: 36,685 bytes in 311 blocks ==25293== total heap usage: 37,167 allocs, 36,856 frees, 7,945,604 bytes allocated ==25293== ==25293== LEAK SUMMARY: ==25293== definitely lost: 0 bytes in 0 blocks ==25293== indirectly lost: 0 bytes in 0 blocks ==25293== possibly lost: 0 bytes in 0 blocks ==25293== still reachable: 56 bytes in 3 blocks ==25293== suppressed: 36,629 bytes in 308 blocks ==25293== Reachable blocks (those to which a pointer was found) are not shown. ==25293== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25293== ==25293== For lists of detected and suppressed errors, rerun with: -s ==25293== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)