==40801== Memcheck, a memory error detector ==40801== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40801== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40801== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMatrixVentilationProblem -malloc_debug -malloc_dump -memory_info ==40801== Parent PID: 24026 ==40801== ==40801== ==40801== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40801== Open file descriptor 12: ==40801== at 0x81F60FD: pipe (pipe.c:29) ==40801== by 0x107C907D: ??? ==40801== by 0xBD4E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40801== by 0x83F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40801== by 0x838AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40801== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40801== by 0x7A0DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40801== by 0x7A0DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40801== by 0x117742: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40801== by 0x1128B9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40801== by 0x1155E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40801== by 0x115486: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40801== by 0x115B1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40801== by 0x110B35: main (TestMatrixVentilationProblem.cpp:19) ==40801== ==40801== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40801== at 0x81FAA9C: __open_nocancel (open64_nocancel.c:39) ==40801== by 0x817EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40801== by 0x7A50822: ??? ==40801== by 0x7A5096F: ??? ==40801== by 0xBDF36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40801== by 0xBDF3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40801== by 0xBDA9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40801== by 0xBD4E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40801== by 0x83F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40801== by 0x838AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40801== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40801== by 0x7A0DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40801== by 0x7A0DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40801== by 0x117742: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40801== by 0x1128B9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40801== by 0x1155E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40801== by 0x115486: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40801== by 0x115B1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40801== by 0x110B35: main (TestMatrixVentilationProblem.cpp:19) ==40801== ==40801== Open file descriptor 145: ==40801== ==40801== ==40801== Open file descriptor 142: ==40801== ==40801== ==40801== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMatrixVentilationProblem_valgrind.txt ==40801== ==40801== ==40801== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40801== ==40801== ==40801== ==40801== HEAP SUMMARY: ==40801== in use at exit: 36,653 bytes in 310 blocks ==40801== total heap usage: 121,224 allocs, 120,914 frees, 184,153,544 bytes allocated ==40801== ==40801== LEAK SUMMARY: ==40801== definitely lost: 0 bytes in 0 blocks ==40801== indirectly lost: 0 bytes in 0 blocks ==40801== possibly lost: 0 bytes in 0 blocks ==40801== still reachable: 24 bytes in 2 blocks ==40801== suppressed: 36,629 bytes in 308 blocks ==40801== Reachable blocks (those to which a pointer was found) are not shown. ==40801== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40801== ==40801== For lists of detected and suppressed errors, rerun with: -s ==40801== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)