==25345== Memcheck, a memory error detector ==25345== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25345== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25345== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedSrnModels -malloc_debug -malloc_dump -memory_info ==25345== Parent PID: 24026 ==25345== ==25345== ==25345== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25345== Open file descriptor 12: ==25345== at 0xED680FD: pipe (pipe.c:29) ==25345== by 0x196DA07D: ??? ==25345== by 0x13C274CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25345== by 0xE9B7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25345== by 0xE950D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25345== by 0xD647D38: PetscInitialize (pinit.c:924) ==25345== by 0xD4B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25345== by 0xD4B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25345== by 0x12E285: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25345== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25345== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25345== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25345== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25345== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==25345== ==25345== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25345== at 0xED6CA9C: __open_nocancel (open64_nocancel.c:39) ==25345== by 0xECF0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25345== by 0xD4F7822: ??? ==25345== by 0xD4F796F: ??? ==25345== by 0x13CCC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25345== by 0x13CCC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25345== by 0x13C82922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25345== by 0x13C272DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25345== by 0xE9B7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25345== by 0xE950D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25345== by 0xD647D38: PetscInitialize (pinit.c:924) ==25345== by 0xD4B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25345== by 0xD4B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25345== by 0x12E285: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25345== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25345== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25345== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25345== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25345== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==25345== ==25345== Open file descriptor 145: ==25345== ==25345== ==25345== Open file descriptor 142: ==25345== ==25345== ==25345== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedSrnModels_valgrind.txt ==25345== ==25345== ==25345== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25345== ==25345== ==25345== ==25345== HEAP SUMMARY: ==25345== in use at exit: 36,701 bytes in 312 blocks ==25345== total heap usage: 40,993 allocs, 40,681 frees, 8,431,031 bytes allocated ==25345== ==25345== LEAK SUMMARY: ==25345== definitely lost: 0 bytes in 0 blocks ==25345== indirectly lost: 0 bytes in 0 blocks ==25345== possibly lost: 0 bytes in 0 blocks ==25345== still reachable: 72 bytes in 4 blocks ==25345== suppressed: 36,629 bytes in 308 blocks ==25345== Reachable blocks (those to which a pointer was found) are not shown. ==25345== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25345== ==25345== For lists of detected and suppressed errors, rerun with: -s ==25345== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)