==26304== Memcheck, a memory error detector ==26304== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26304== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26304== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==26304== Parent PID: 24182 ==26304== ==26304== ==26304== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26304== Open file descriptor 12: ==26304== at 0xF0AF0FD: pipe (pipe.c:29) ==26304== by 0x196DA07D: ??? ==26304== by 0x13C744CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26304== by 0xECFC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26304== by 0xEC95D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26304== by 0xD98CD38: PetscInitialize (pinit.c:924) ==26304== by 0xD4B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26304== by 0xD4B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26304== by 0x133B29: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26304== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26304== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26304== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26304== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26304== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26304== ==26304== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26304== at 0xF0B3A9C: __open_nocancel (open64_nocancel.c:39) ==26304== by 0xF037BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26304== by 0xD4F7822: ??? ==26304== by 0xD4F796F: ??? ==26304== by 0x13D196DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26304== by 0x13D19938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26304== by 0x13CCF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26304== by 0x13C742DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26304== by 0xECFC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26304== by 0xEC95D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26304== by 0xD98CD38: PetscInitialize (pinit.c:924) ==26304== by 0xD4B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26304== by 0xD4B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26304== by 0x133B29: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26304== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26304== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26304== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26304== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26304== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26304== ==26304== Open file descriptor 145: ==26304== ==26304== ==26304== Open file descriptor 142: ==26304== ==26304== ==26304== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==26304== ==26304== ==26304== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26304== ==26304== ==26304== ==26304== HEAP SUMMARY: ==26304== in use at exit: 35,215 bytes in 290 blocks ==26304== total heap usage: 51,319 allocs, 51,029 frees, 8,897,444 bytes allocated ==26304== ==26304== LEAK SUMMARY: ==26304== definitely lost: 0 bytes in 0 blocks ==26304== indirectly lost: 0 bytes in 0 blocks ==26304== possibly lost: 0 bytes in 0 blocks ==26304== still reachable: 56 bytes in 3 blocks ==26304== suppressed: 35,159 bytes in 287 blocks ==26304== Reachable blocks (those to which a pointer was found) are not shown. ==26304== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26304== ==26304== For lists of detected and suppressed errors, rerun with: -s ==26304== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)