==26213== Memcheck, a memory error detector ==26213== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26213== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26213== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==26213== Parent PID: 24163 ==26213== ==26213== ==26213== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26213== Open file descriptor 12: ==26213== at 0xF0AF0FD: pipe (pipe.c:29) ==26213== by 0x196DA07D: ??? ==26213== by 0x13C744CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26213== by 0xECFC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26213== by 0xEC95D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26213== by 0xD98CD38: PetscInitialize (pinit.c:924) ==26213== by 0xD4B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26213== by 0xD4B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26213== by 0x133B29: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26213== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26213== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26213== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26213== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26213== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26213== ==26213== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26213== at 0xF0B3A9C: __open_nocancel (open64_nocancel.c:39) ==26213== by 0xF037BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26213== by 0xD4F7822: ??? ==26213== by 0xD4F796F: ??? ==26213== by 0x13D196DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26213== by 0x13D19938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26213== by 0x13CCF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26213== by 0x13C742DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26213== by 0xECFC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26213== by 0xEC95D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26213== by 0xD98CD38: PetscInitialize (pinit.c:924) ==26213== by 0xD4B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26213== by 0xD4B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26213== by 0x133B29: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26213== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26213== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26213== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26213== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26213== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26213== ==26213== Open file descriptor 145: ==26213== ==26213== ==26213== Open file descriptor 142: ==26213== ==26213== ==26213== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==26213== ==26213== ==26213== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26213== ==26213== ==26213== ==26213== HEAP SUMMARY: ==26213== in use at exit: 35,215 bytes in 290 blocks ==26213== total heap usage: 51,318 allocs, 51,028 frees, 8,897,226 bytes allocated ==26213== ==26213== LEAK SUMMARY: ==26213== definitely lost: 0 bytes in 0 blocks ==26213== indirectly lost: 0 bytes in 0 blocks ==26213== possibly lost: 0 bytes in 0 blocks ==26213== still reachable: 56 bytes in 3 blocks ==26213== suppressed: 35,159 bytes in 287 blocks ==26213== Reachable blocks (those to which a pointer was found) are not shown. ==26213== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26213== ==26213== For lists of detected and suppressed errors, rerun with: -s ==26213== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)