==37797== Memcheck, a memory error detector ==37797== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==37797== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==37797== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimpleTargetAreaModifier -malloc_debug -malloc_dump -memory_info ==37797== Parent PID: 24163 ==37797== ==37797== ==37797== FILE DESCRIPTORS: 9 open (3 std) at exit. ==37797== Open file descriptor 12: ==37797== at 0x10D180FD: pipe (pipe.c:29) ==37797== by 0x196DA07D: ??? ==37797== by 0x14C8A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==37797== by 0x10965418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==37797== by 0x108FED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==37797== by 0xF5F5D38: PetscInitialize (pinit.c:924) ==37797== by 0xF11FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==37797== by 0xF11FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==37797== by 0x139C37: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==37797== by 0x1324DD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==37797== by 0x1357DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==37797== by 0x13567C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==37797== by 0x135D13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==37797== by 0x130905: main (TestSimpleTargetAreaModifier.cpp:19) ==37797== ==37797== Open file descriptor 8: /dev/shm/open_mpi.0000 ==37797== at 0x10D1CA9C: __open_nocancel (open64_nocancel.c:39) ==37797== by 0x10CA0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==37797== by 0xF162822: ??? ==37797== by 0xF16296F: ??? ==37797== by 0x14D2F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==37797== by 0x14D2F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==37797== by 0x14CE5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==37797== by 0x14C8A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==37797== by 0x10965418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==37797== by 0x108FED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==37797== by 0xF5F5D38: PetscInitialize (pinit.c:924) ==37797== by 0xF11FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==37797== by 0xF11FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==37797== by 0x139C37: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==37797== by 0x1324DD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==37797== by 0x1357DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==37797== by 0x13567C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==37797== by 0x135D13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==37797== by 0x130905: main (TestSimpleTargetAreaModifier.cpp:19) ==37797== ==37797== Open file descriptor 145: ==37797== ==37797== ==37797== Open file descriptor 142: ==37797== ==37797== ==37797== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleTargetAreaModifier_valgrind.txt ==37797== ==37797== ==37797== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==37797== ==37797== ==37797== ==37797== HEAP SUMMARY: ==37797== in use at exit: 35,215 bytes in 290 blocks ==37797== total heap usage: 572,513 allocs, 572,223 frees, 106,050,642 bytes allocated ==37797== ==37797== LEAK SUMMARY: ==37797== definitely lost: 0 bytes in 0 blocks ==37797== indirectly lost: 0 bytes in 0 blocks ==37797== possibly lost: 0 bytes in 0 blocks ==37797== still reachable: 56 bytes in 3 blocks ==37797== suppressed: 35,159 bytes in 287 blocks ==37797== Reachable blocks (those to which a pointer was found) are not shown. ==37797== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==37797== ==37797== For lists of detected and suppressed errors, rerun with: -s ==37797== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)