==42050== Memcheck, a memory error detector ==42050== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42050== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42050== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==42050== Parent PID: 24183 ==42050== ==42050== ==42050== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42050== Open file descriptor 12: ==42050== at 0xA9C00FD: pipe (pipe.c:29) ==42050== by 0x1436507D: ??? ==42050== by 0xD95E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42050== by 0xA2C8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42050== by 0xA261D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42050== by 0xB132D38: PetscInitialize (pinit.c:924) ==42050== by 0xA16DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42050== by 0xA16DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42050== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42050== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42050== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42050== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42050== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42050== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==42050== ==42050== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42050== at 0xA9C4A9C: __open_nocancel (open64_nocancel.c:39) ==42050== by 0xA948BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42050== by 0xA1AA822: ??? ==42050== by 0xA1AA96F: ??? ==42050== by 0xDA036DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42050== by 0xDA03938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42050== by 0xD9B9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42050== by 0xD95E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42050== by 0xA2C8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42050== by 0xA261D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42050== by 0xB132D38: PetscInitialize (pinit.c:924) ==42050== by 0xA16DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42050== by 0xA16DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42050== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42050== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42050== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42050== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42050== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42050== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==42050== ==42050== Open file descriptor 145: ==42050== ==42050== ==42050== Open file descriptor 142: ==42050== ==42050== ==42050== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==42050== ==42050== ==42050== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42050== ==42050== ==42050== ==42050== HEAP SUMMARY: ==42050== in use at exit: 35,590 bytes in 295 blocks ==42050== total heap usage: 2,356,743 allocs, 2,356,448 frees, 1,137,201,135 bytes allocated ==42050== ==42050== LEAK SUMMARY: ==42050== definitely lost: 0 bytes in 0 blocks ==42050== indirectly lost: 0 bytes in 0 blocks ==42050== possibly lost: 0 bytes in 0 blocks ==42050== still reachable: 24 bytes in 2 blocks ==42050== suppressed: 35,566 bytes in 293 blocks ==42050== Reachable blocks (those to which a pointer was found) are not shown. ==42050== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42050== ==42050== For lists of detected and suppressed errors, rerun with: -s ==42050== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 31)