==41138== Memcheck, a memory error detector ==41138== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41138== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41138== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexCryptBoundaryForce -malloc_debug -malloc_dump -memory_info ==41138== Parent PID: 24183 ==41138== ==41138== ==41138== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41138== Open file descriptor 12: ==41138== at 0x110DF0FD: pipe (pipe.c:29) ==41138== by 0x1B39F07D: ??? ==41138== by 0x143E54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41138== by 0x11B03418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41138== by 0x11A9CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41138== by 0x11C48D38: PetscInitialize (pinit.c:924) ==41138== by 0x109DFE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41138== by 0x109DFEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41138== by 0x126AD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41138== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41138== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41138== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41138== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41138== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==41138== ==41138== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41138== at 0x110E3A9C: __open_nocancel (open64_nocancel.c:39) ==41138== by 0x11067BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41138== by 0x10A1C822: ??? ==41138== by 0x10A1C96F: ??? ==41138== by 0x1448A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41138== by 0x1448A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41138== by 0x14440922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41138== by 0x143E52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41138== by 0x11B03418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41138== by 0x11A9CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41138== by 0x11C48D38: PetscInitialize (pinit.c:924) ==41138== by 0x109DFE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41138== by 0x109DFEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41138== by 0x126AD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41138== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41138== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41138== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41138== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41138== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==41138== ==41138== Open file descriptor 145: ==41138== ==41138== ==41138== Open file descriptor 142: ==41138== ==41138== ==41138== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexCryptBoundaryForce_valgrind.txt ==41138== ==41138== ==41138== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41138== ==41138== ==41138== ==41138== HEAP SUMMARY: ==41138== in use at exit: 35,215 bytes in 290 blocks ==41138== total heap usage: 40,299 allocs, 40,009 frees, 8,094,706 bytes allocated ==41138== ==41138== LEAK SUMMARY: ==41138== definitely lost: 0 bytes in 0 blocks ==41138== indirectly lost: 0 bytes in 0 blocks ==41138== possibly lost: 0 bytes in 0 blocks ==41138== still reachable: 56 bytes in 3 blocks ==41138== suppressed: 35,159 bytes in 287 blocks ==41138== Reachable blocks (those to which a pointer was found) are not shown. ==41138== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41138== ==41138== For lists of detected and suppressed errors, rerun with: -s ==41138== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)